RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 OR5P2Q8WZ92 322 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 PHF3Q92576 2039 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 PPCDCQ96CD2 204 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 DNAJC19Q96DA6 116 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 STARD4Q96DR4 205 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SMIM19Q96E16 107 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TVP23CQ96ET8 276 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 PGLYRP4Q96LB8 373 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 PLIN4Q96Q06 1357 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SDF2Q99470 211 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CDX2Q99626 313 aaPredicted RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SPIN2AQ99865 258 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SPIN2BQ9BPZ2 258 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TBL1YQ9BQ87 522 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 NAA38Q9BRA0 125 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 RTBDNQ9BSG5 229 aaPredicted RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 RNF126Q9BV68 326 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SLC17A9Q9BYT1 436 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 WDR61Q9GZS3 305 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 EIF5A2Q9GZV4 153 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 OR51I1Q9H343 314 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 MAP1LC3AQ9H492 121 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 DOCK5Q9H7D0 1870 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 HES4Q9HCC6 221 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 FGF20Q9NP95 211 aaPredicted RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 GPR84Q9NQS5 396 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 CD163L1Q9NR16 1453 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 KCNIP1Q9NZI2 227 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 COMMD9Q9P000 198 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 SCN11AQ9UI33 1791 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 BAZ2AQ9UIF9 1905 aaKnown RBP1.53□□□□□ -2.16
LINC02540-201ENST00000455554 HES2Q9Y543 173 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 LINC00312Q9Y6C7 94 aa1.53□□□□□ -2.16
LINC02540-201ENST00000455554 TDRD6O60522 2096 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ATG2AQ2TAZ0 1938 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 FOCADQ5VW36 1801 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 PHLPP1O60346 1717 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ARAP2Q8WZ64 1704 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ABCA3Q99758 1704 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 NWD2Q9ULI1 1742 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 PLCH1Q4KWH8 1693 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 IGLV3-22A0A075B6J6 115 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 A0A0G2JRQ6 117 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 IRGMA1A4Y4 181 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 C7orf71A4D174 169 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 FAM231BA6NCW3 169 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 A6NDN8 102 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR51F1A6NGY5 319 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR4C46A6NHA9 309 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 A6NIN4 97 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TMEM212A6NML5 194 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR4C45A6NMZ5 311 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF850A8MQ14 1090 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 C9JAW5 83 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 H0YJW9 148 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 H3BRM9 83 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 J3KT08 172 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 M0R1X1 148 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SIRPB1O00241 398 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CCL21O00585 134 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CDC42EP2O14613 210 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 HCRTO43612 131 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SYNGR1O43759 233 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CHST1O43916 411 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 NUPR1O60356 82 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR7C1O76099 320 aaPredicted RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF682O95780 498 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 LY6G6DO95868 133 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CYB5AP00167 134 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TIMP1P01033 207 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TTRP02766 147 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 HLA-DPB1P04440 258 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 IFNW1P05000 195 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 REG1AP05451 166 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 KLK1P06870 262 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 PFN1P07737 140 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SRP19P09132 144 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SLC25A6P12236 298 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 MDKP21741 143 aaPredicted RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 GRPRP30550 384 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SRP14P37108 136 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR1E2P47887 323 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 LHX2P50458 406 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 POLR2JP52435 117 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 FBXW4P57775 412 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 UBE2MP61081 183 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 LCN6P62502 163 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 GNB2P62879 340 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 HLA-DRB3P79483 266 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TNFAIP6P98066 277 aaPredicted RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SLC25A11Q02978 314 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 MEF2CQ06413 473 aaPredicted RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CATR1Q13166 79 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 KLRD1Q13241 179 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 EDDM3AQ14507 147 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ADIRFQ15847 76 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CCL15Q16663 113 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TBC1D28Q2M2D7 210 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 MPV17LQ2QL34 196 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TCEAL5Q5H9L2 206 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms