RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 IGHV3-74A0A0B4J1X5 117 aa18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 RPL7P18124 248 aaKnown RBP18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 CBLN1P23435 193 aa18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 SRIP30626 198 aa18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 SRSF12Q8WXF0 261 aaKnown RBP18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 NBEAP1P0C6P0 100 aa18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 CA7P43166 264 aa18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 SCO2A0A1W2PP80 73 aa18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 CYTL1Q9NRR1 136 aa18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 ETV2O00321 342 aaPredicted RBP18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 FOXL2NBQ6ZUU3 175 aa18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 OR4C5Q8NGB2 326 aa18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 HSPB8Q9UJY1 196 aa18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 IGHV1-46P01743 117 aa18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 CACNA1AO00555 2505 aa18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 CHODLQ9H9P2 273 aa18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 ZGRF1Q86YA3 2104 aa18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 SLC17A3O00476 420 aa18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 TWIST1Q15672 202 aa18.69■□□□□ 0.58
CTDSPL-206ENST00000443503 ICAM4Q14773 271 aa18.68■□□□□ 0.58
CTDSPL-206ENST00000443503 RNFT1Q5M7Z0 435 aa18.68■□□□□ 0.58
CTDSPL-206ENST00000443503 MIR17HGQ75NE6 70 aa18.68■□□□□ 0.58
CTDSPL-206ENST00000443503 TANC1Q9C0D5 1861 aa18.68■□□□□ 0.58
CTDSPL-206ENST00000443503 FRMPD3Q5JV73 1810 aa18.68■□□□□ 0.58
CTDSPL-206ENST00000443503 SDF2L1Q9HCN8 221 aa18.68■□□□□ 0.58
CTDSPL-206ENST00000443503 RELBQ01201 579 aa18.68■□□□□ 0.58
CTDSPL-206ENST00000443503 RBPMS2Q6ZRY4 209 aaKnown RBP18.68■□□□□ 0.58
CTDSPL-206ENST00000443503 SPACA3Q8IXA5 215 aa18.68■□□□□ 0.58
CTDSPL-206ENST00000443503 UPK2O00526 184 aa18.67■□□□□ 0.58
CTDSPL-206ENST00000443503 LCN2P80188 198 aa18.67■□□□□ 0.58
CTDSPL-206ENST00000443503 IGKV1D-33P01593 117 aa18.67■□□□□ 0.58
CTDSPL-206ENST00000443503 IGKV1-33P01594 117 aa18.67■□□□□ 0.58
CTDSPL-206ENST00000443503 OR9G9P0C7N8 305 aa18.67■□□□□ 0.58
CTDSPL-206ENST00000443503 TMEM144Q7Z5S9 345 aa18.67■□□□□ 0.58
CTDSPL-206ENST00000443503 SLC25A33Q9BSK2 321 aa18.67■□□□□ 0.58
CTDSPL-206ENST00000443503 RBFOX2O43251 390 aaKnown RBP eCLIP18.67■□□□□ 0.584e-6■□□□□ 9
CTDSPL-206ENST00000443503 C15orf61A6NNL5 157 aa18.67■□□□□ 0.58
CTDSPL-206ENST00000443503 CACNG8Q8WXS5 425 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 METRNQ9UJH8 293 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 RAXQ9Y2V3 346 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 FOXH1O75593 365 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 ZNF738Q8NE65 137 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 DGAT2L7PQ6IED9 249 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 DOCK11Q5JSL3 2073 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 COX6B1P14854 86 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 TIMP3P35625 211 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 GPX4P36969 197 aaPredicted RBP18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 SRSF7Q16629 238 aaKnown RBP eCLIP18.66■□□□□ 0.583e-7■■■■□ 23.5
CTDSPL-206ENST00000443503 RNASE6Q93091 150 aaKnown RBP18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 PIMREGQ9BSJ6 248 aa18.66■□□□□ 0.58
CTDSPL-206ENST00000443503 GCGP01275 180 aa18.65■□□□□ 0.58
CTDSPL-206ENST00000443503 NMSQ5H8A3 153 aa18.65■□□□□ 0.58
CTDSPL-206ENST00000443503 NEU1Q99519 415 aa18.65■□□□□ 0.58
CTDSPL-206ENST00000443503 TMEM97Q5BJF2 176 aa18.65■□□□□ 0.58
CTDSPL-206ENST00000443503 CKS2P33552 79 aa18.65■□□□□ 0.58
CTDSPL-206ENST00000443503 Q1RN00 199 aa18.65■□□□□ 0.58
CTDSPL-206ENST00000443503 AMY1AP04745 511 aa18.64■□□□□ 0.58
CTDSPL-206ENST00000443503 PROK2Q9HC23 129 aa18.64■□□□□ 0.58
CTDSPL-206ENST00000443503 PTPRQQ9UMZ3 2332 aa18.64■□□□□ 0.58
CTDSPL-206ENST00000443503 TCTAP57738 103 aa18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 VSIRQ9H7M9 311 aa18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 SLC25A15Q9Y619 301 aa18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 MAS1LP35410 378 aa18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 PDLIM4P50479 330 aa18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 GCSAMLQ5JQS6 135 aa18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 IGKV1-5P01602 117 aa18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 CDKN1AP38936 164 aa18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 ID1P41134 155 aa18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 FOXA2Q9Y261 457 aaPredicted RBP18.64■□□□□ 0.57
CTDSPL-206ENST00000443503 IGHV3OR16-8A0A075B7F1 116 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 IGHV3-49A0A0A0MS15 119 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 C1QTNF9BB2RNN3 333 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 RPL23P62829 140 aaKnown RBP18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 NEU4Q8WWR8 484 aaPredicted RBP18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 HS3ST6Q96QI5 342 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 WDR83OSQ9Y284 106 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 RFNGQ9Y644 331 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 DENND4CQ5VZ89 1909 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 IGHV3-23P01764 117 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 TM4SF20Q53R12 229 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 OR10J6PQ8NGY7 276 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 DYNLRB2Q8TF09 96 aa18.63■□□□□ 0.57
CTDSPL-206ENST00000443503 A0A1W2PS18 150 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 RPUSD1Q9UJJ7 312 aaKnown RBP18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 NOTCH2Q04721 2471 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 PLCE1Q9P212 2302 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 RNF224P0DH78 156 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 OR52E5Q8NH55 327 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 CD24P25063 80 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 TMEM133Q9H2Q1 129 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 IFITM10A6NMD0 228 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 LEPROTL1O95214 131 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 MBNL2Q5VZF2 373 aaKnown RBP18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 CD177Q8N6Q3 437 aa18.62■□□□□ 0.57
CTDSPL-206ENST00000443503 RNASEH2CQ8TDP1 164 aaKnown RBP18.61■□□□□ 0.57
CTDSPL-206ENST00000443503 C1orf147Q96MC9 270 aaPredicted RBP18.61■□□□□ 0.57
CTDSPL-206ENST00000443503 GOLGB1Q14789 3259 aaKnown RBP18.61■□□□□ 0.57
CTDSPL-206ENST00000443503 A0A087WWC5 75 aa18.61■□□□□ 0.57
CTDSPL-206ENST00000443503 CD99P14209 185 aa18.61■□□□□ 0.57
CTDSPL-206ENST00000443503 CFPP27918 469 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms