RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 LCN12Q6JVE5 192 aa9.83□□□□□ -0.84
LTBR-203ENST00000441074 SCCPDHQ8NBX0 429 aa9.83□□□□□ -0.84
LTBR-203ENST00000441074 NANOS1Q8WY41 292 aaKnown RBP9.83□□□□□ -0.84
LTBR-203ENST00000441074 SPRR3Q9UBC9 169 aa9.83□□□□□ -0.84
LTBR-203ENST00000441074 ARL2-SNX15V9GYD0 113 aa9.83□□□□□ -0.84
LTBR-203ENST00000441074 GTF3C1Q12789 2109 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 NBEAQ8NFP9 2946 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 PRSS46E5RG02 174 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 H0YJW9 148 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 APCSP02743 223 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 LINC00869P0C866 280 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 ERVK11-1P61568 191 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 TBR1Q16650 682 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 CENPWQ5EE01 88 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 SPACA3Q8IXA5 215 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 KLF13Q9Y2Y9 288 aaPredicted RBP9.82□□□□□ -0.84
LTBR-203ENST00000441074 SVILO95425 2214 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 SMIM27A0A1W2PRY6 76 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 ISLRO14498 428 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 IGLL1P15814 213 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 EFNB3Q15768 340 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 OR52L2PQ8NGH6 319 aa9.82□□□□□ -0.84
LTBR-203ENST00000441074 M0QZ24 198 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 ZNF146Q15072 292 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 IGFBP7Q16270 282 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 SPATA31B1PQ5VZV4 182 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 PQLC2Q6ZP29 291 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 SLC24A4Q8NFF2 622 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 OR8B3Q8NGG8 313 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 C18orf32Q8TCD1 76 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 CORO2AQ92828 525 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 OR8B2Q96RD0 313 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 VPS25Q9BRG1 176 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 RNASE7Q9H1E1 156 aaKnown RBP9.81□□□□□ -0.84
LTBR-203ENST00000441074 CST9LQ9H4G1 147 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 C12orf49Q9H741 205 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 SEPSECSQ9HD40 501 aaKnown RBP9.81□□□□□ -0.84
LTBR-203ENST00000441074 LSM4Q9Y4Z0 139 aaKnown RBP9.81□□□□□ -0.84
LTBR-203ENST00000441074 FREM1Q5H8C1 2179 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 TMEM30CPA0ZSE6 113 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 FAM181BA6NEQ2 426 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 CBY3A6NI87 242 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 FAM90A9PA6NNJ1 464 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 C12orf77C9JDV5 145 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 FOXH1O75593 365 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 OR9G9P0C7N8 305 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 GABRA2P47869 451 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 SLC35B1P78383 322 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 TIGITQ495A1 244 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 OCIAD2Q56VL3 154 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 MRPL54Q6P161 138 aaKnown RBP9.81□□□□□ -0.84
LTBR-203ENST00000441074 DOLPP1Q86YN1 238 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 NUDT10Q8NFP7 164 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 NPVFQ9HCQ7 196 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 IL19Q9UHD0 177 aa9.81□□□□□ -0.84
LTBR-203ENST00000441074 IZUMO1RA6ND01 250 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 LINC00473A8K010 186 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 ZNF891A8MT65 544 aaPredicted RBP9.8□□□□□ -0.84
LTBR-203ENST00000441074 VDAC2P45880 294 aaPredicted RBP9.8□□□□□ -0.84
LTBR-203ENST00000441074 TCL1AP56279 114 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 FXYD3Q14802 87 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 FAM53AQ6NSI3 398 aaPredicted RBP9.8□□□□□ -0.84
LTBR-203ENST00000441074 EBLN2Q6P2I7 272 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 SSMEM1Q8WWF3 244 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 NINJ1Q92982 152 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 C1orf159Q96HA4 380 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 HSD17B10Q99714 261 aaKnown RBP9.8□□□□□ -0.84
LTBR-203ENST00000441074 NCOR1P1Q9H4R4 102 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 KALRNO60229 2985 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 DOCK7Q96N67 2140 aa9.8□□□□□ -0.84
LTBR-203ENST00000441074 DIDO1Q9BTC0 2240 aaKnown RBP9.79□□□□□ -0.84
LTBR-203ENST00000441074 PTPRQQ9UMZ3 2332 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 OOEPA6NGQ2 149 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 CGAP01215 116 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 HBZP02008 142 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 USF1P22415 310 aaPredicted RBP9.79□□□□□ -0.84
LTBR-203ENST00000441074 UBE2G1P62253 170 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 TNXAQ16473 311 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 Q56UQ5 140 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 LDLRAD2Q5SZI1 272 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 RASL11AQ6T310 242 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 OR52E5Q8NH55 327 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 WIPF2Q8TF74 440 aaPredicted RBP9.79□□□□□ -0.84
LTBR-203ENST00000441074 HEYLQ9NQ87 328 aaPredicted RBP9.79□□□□□ -0.84
LTBR-203ENST00000441074 ZNF331Q9NQX6 463 aaPredicted RBP9.79□□□□□ -0.84
LTBR-203ENST00000441074 TRGV5A0A0B4J1U4 118 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 TAX1BP3O14907 124 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 HSBP1O75506 76 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 CRYBB3P26998 211 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 KLF5Q13887 457 aaPredicted RBP9.79□□□□□ -0.84
LTBR-203ENST00000441074 TBC1D28Q2M2D7 210 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 STPG3Q8N7X2 389 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 GP6Q9HCN6 339 aa9.79□□□□□ -0.84
LTBR-203ENST00000441074 SLC25A10Q9UBX3 287 aaPredicted RBP9.79□□□□□ -0.84
LTBR-203ENST00000441074 C2orf70A6NJV1 201 aa9.78□□□□□ -0.84
LTBR-203ENST00000441074 M0R2Z0 102 aa9.78□□□□□ -0.84
LTBR-203ENST00000441074 RELBQ01201 579 aa9.78□□□□□ -0.84
LTBR-203ENST00000441074 SLAQ13239 276 aa9.78□□□□□ -0.84
LTBR-203ENST00000441074 MRPL49Q13405 166 aaKnown RBP9.78□□□□□ -0.84
LTBR-203ENST00000441074 GABRA6Q16445 453 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms