RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 LHFPL4Q7Z7J7 247 aa11.66□□□□□ -0.54
TNFRSF1A-204ENST00000440083 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
TNFRSF1A-204ENST00000440083 OR5B3Q8NH48 314 aa11.66□□□□□ -0.54
TNFRSF1A-204ENST00000440083 FAM213BQ8TBF2 198 aa11.66□□□□□ -0.54
TNFRSF1A-204ENST00000440083 MARC2Q969Z3 335 aa11.66□□□□□ -0.54
TNFRSF1A-204ENST00000440083 HRH4Q9H3N8 390 aa11.66□□□□□ -0.54
TNFRSF1A-204ENST00000440083 TNFRSF19Q9NS68 423 aa11.66□□□□□ -0.54
TNFRSF1A-204ENST00000440083 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
TNFRSF1A-204ENST00000440083 IGHV3-72A0A0B4J1Y9 119 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 IGHV1-3A0A0C4DH29 117 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 RAB19A4D1S5 217 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 C15orf62A8K5M9 175 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 ODF3BA8MYP8 253 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 NPY1RP25929 384 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 RPL8P62917 257 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 PRCDQ00LT1 54 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 LRRC75BQ2VPJ9 315 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 KRTAP24-1Q3LI83 254 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 ETV3LQ6ZN32 361 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 THNSL2Q86YJ6 484 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 EIF4E3Q8N5X7 224 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 SLC24A4Q8NFF2 622 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 TMEM167AQ8TBQ9 72 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 COMMD5Q9GZQ3 224 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 WDR61Q9GZS3 305 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 DPM3Q9P2X0 92 aa11.65□□□□□ -0.54
TNFRSF1A-204ENST00000440083 HOXA3O43365 443 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 IFNA4P05014 189 aa11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 IL6RP08887 468 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 FGF7P21781 194 aa11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 BPIFB3P59826 476 aa11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 UQCC3Q6UW78 93 aa11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 DPPA3Q6W0C5 159 aa11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 RBMS3Q6XE24 437 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 MRPL41Q8IXM3 137 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 DYNAPQ8N1N2 210 aa11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 OR1L8Q8NGR8 309 aa11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 PSMG3Q9BT73 122 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 FAM96BQ9Y3D0 163 aa11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 STAB1Q9NY15 2570 aa11.64□□□□□ -0.55
TNFRSF1A-204ENST00000440083 A0A1W2PN81 502 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 PMS2P5A8MQ11 134 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 SLC25A17O43808 307 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 TSPAN15O95858 294 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 IGHV4-59P01825 116 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 ZP3P21754 424 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 CHRNA7P36544 502 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 LGALS4P56470 323 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 RAB2AP61019 212 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 PJVKQ0ZLH3 352 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 Q6YL49 198 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 TAF15Q92804 592 aaKnown RBP eCLIP11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 MDFIQ99750 246 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 PRDM13Q9H4Q3 707 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 FBXO7Q9Y3I1 522 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 TIMM9Q9Y5J7 89 aa11.63□□□□□ -0.55
TNFRSF1A-204ENST00000440083 TEX50A0A1B0GTY4 177 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 A0A1W2PPI3 338 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 SMCO3A2RU48 225 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 KRBOX1C9JBD0 128 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 C17orf112F2Z3M2 114 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 LY6LH3BQJ8 138 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 OPN1MWP04001 364 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 OPN1MW2P0DN77 364 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 OPN1MW3P0DN78 364 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 MYOD1P15172 320 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 ATP5IP56385 69 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 DLK1P80370 383 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 MINOS1Q5TGZ0 78 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 CCDC144NLQ6NUI1 221 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 BTNL8Q6UX41 500 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 COMMD1Q8N668 190 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 ZNF709Q8N972 641 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 TEX45Q8NA69 505 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 RBMXL1Q96E39 390 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 NARS2Q96I59 477 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 RSG1Q9BU20 258 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 GGACTQ9BVM4 153 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 MINOS1-NBL1R4GNA1 71 aa11.62□□□□□ -0.55
TNFRSF1A-204ENST00000440083 OOSP1A8MZH6 123 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 ACTL6BO94805 426 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 IGLV2-23P01705 113 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 FBP1P09467 338 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 SNCAP37840 140 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 ERHP84090 104 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 VWC2Q2TAL6 325 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 MMD2Q8IY49 270 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 LFNGQ8NES3 379 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 JMJD8Q96S16 334 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 RNF5Q99942 180 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 HILPDAQ9Y5L2 63 aa11.61□□□□□ -0.55
TNFRSF1A-204ENST00000440083 TENM1Q9UKZ4 2725 aa11.6□□□□□ -0.55
TNFRSF1A-204ENST00000440083 RRHO14718 337 aa11.6□□□□□ -0.55
TNFRSF1A-204ENST00000440083 TIMM23O14925 209 aa11.6□□□□□ -0.55
TNFRSF1A-204ENST00000440083 CA2P00918 260 aa11.6□□□□□ -0.55
TNFRSF1A-204ENST00000440083 HBE1P02100 147 aa11.6□□□□□ -0.55
TNFRSF1A-204ENST00000440083 CD1BP29016 333 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms