RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 C20orf27Q9GZN8 174 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 WDR61Q9GZS3 305 aaKnown RBP0.64□□□□□ -2.31
CDC40-204ENST00000431461 COQ4Q9Y3A0 265 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 PTPRBP23467 1997 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 RIC1Q4ADV7 1423 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 EVC2Q86UK5 1308 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 TONSLQ96HA7 1378 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 A0A087WX48 190 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 TRAV14DV4A0A0A6YYC5 116 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 IBA57-AS1B1ANH7 110 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 SERPINA6P08185 405 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 BAALC-AS2P0C853 105 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H1EP10412 219 aaKnown RBP0.63□□□□□ -2.31
CDC40-204ENST00000431461 RPS4Y1P22090 263 aaKnown RBP0.63□□□□□ -2.31
CDC40-204ENST00000431461 RPS12P25398 132 aaKnown RBP0.63□□□□□ -2.31
CDC40-204ENST00000431461 HLA-DMBP28068 263 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 MAP2K4P45985 399 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 OMPP47874 163 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 AQP4P55087 323 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 CDK5R1Q15078 307 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 RGS21Q2M5E4 152 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 C10orf55Q5SWW7 151 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 FAM27BQ5VT28 67 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.63□□□□□ -2.31
CDC40-204ENST00000431461 OR4C6Q8NH72 309 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 DDI1Q8WTU0 396 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 SLC35B4Q969S0 331 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 DCUN1D1Q96GG9 259 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 LLPHQ9BRT6 129 aaKnown RBP0.63□□□□□ -2.31
CDC40-204ENST00000431461 VPS29Q9UBQ0 182 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 GUCA1BQ9UMX6 200 aa0.63□□□□□ -2.31
CDC40-204ENST00000431461 AMMECR1Q9Y4X0 333 aaPredicted RBP0.63□□□□□ -2.31
CDC40-204ENST00000431461 CCDC88CQ9P219 2028 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 MALRD1Q5VYJ5 2156 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 NUP155O75694 1391 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 PQLC2LA1A4F0 135 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 EEF1E1-BLOC1S5C9J1V9 151 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 CLDN25C9JDP6 229 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 TGOLN2O43493 480 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 FADS1O60427 444 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 IFNA5P01569 189 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 HLA-DRB1P01911 266 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 REG1AP05451 166 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 UBBP0CG47 229 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 NKX2-5P52952 324 aaPredicted RBP0.62□□□□□ -2.31
CDC40-204ENST00000431461 TCL1AP56279 114 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 AP3S2P59780 193 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 SPCS3P61009 180 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 UBE2IP63279 158 aaKnown RBP0.62□□□□□ -2.31
CDC40-204ENST00000431461 OR2F1Q13607 317 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 IMPG1Q17R60 797 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 SAPCD1Q5SSQ6 148 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 SFXN4Q6P4A7 337 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 FAM173BQ6P4H8 233 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 ZNF826PQ6ZT77 177 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 MIR17HGQ75NE6 70 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 TRAPPC6BQ86SZ2 158 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 PACRGLQ8N7B6 248 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 ZNF439Q8NDP4 499 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 BORCS7Q96B45 105 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 TOMM6Q96B49 74 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 NIPSNAP1Q9BPW8 284 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 CMSS1Q9BQ75 279 aaKnown RBP0.62□□□□□ -2.31
CDC40-204ENST00000431461 GINS4Q9BRT9 223 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 OR51I1Q9H343 314 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 PARVGQ9HBI0 331 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 TMEM56-RWDD3S4R434 201 aa0.62□□□□□ -2.31
CDC40-204ENST00000431461 WDR90Q96KV7 1748 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 CPAMD8Q8IZJ3 1885 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 TRAV9-1A0A075B6T8 112 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 A0A0J9YY10 115 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 A0A1B0GX78 115 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 GEMIN2O14893 280 aaKnown RBP0.61□□□□□ -2.31
CDC40-204ENST00000431461 HYPMO75409 117 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 PROSCO94903 275 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 TNNC2P02585 160 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 IFNA16P05015 189 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 RBP1P09455 135 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H1TP22492 207 aaPredicted RBP0.61□□□□□ -2.31
CDC40-204ENST00000431461 S100A4P26447 101 aaKnown RBP0.61□□□□□ -2.31
CDC40-204ENST00000431461 BRS3P32247 399 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 EIF2B2P49770 351 aaKnown RBP0.61□□□□□ -2.31
CDC40-204ENST00000431461 YPEL3P61236 119 aaPredicted RBP0.61□□□□□ -2.31
CDC40-204ENST00000431461 SNRPD2P62316 118 aaKnown RBP0.61□□□□□ -2.31
CDC40-204ENST00000431461 HBA1P69905 142 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 GUK1Q16774 197 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 ACOT6Q3I5F7 207 aaPredicted RBP0.61□□□□□ -2.31
CDC40-204ENST00000431461 AKIRIN2Q53H80 203 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 AADACL3Q5VUY0 350 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 TEX36Q5VZQ5 186 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 SPOPLQ6IQ16 392 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 LCN15Q6UWW0 184 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 OTUD6BQ8N6M0 293 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 C9orf163Q8N9P6 203 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 OR4E2Q8NGC2 313 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 C2orf50Q96LR7 162 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 DERL1Q9BUN8 251 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 ULBP3Q9BZM4 244 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 OR8D2Q9GZM6 311 aa0.61□□□□□ -2.31
CDC40-204ENST00000431461 RNF122Q9H9V4 155 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms