RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 NPBQ8NG41 125 aa17.61■□□□□ 0.41
VSX1-205ENST00000429762 KIAA1456Q9P272 454 aa17.61■□□□□ 0.41
VSX1-205ENST00000429762 IGLC7A0M8Q6 106 aa17.6■□□□□ 0.41
VSX1-205ENST00000429762 BSXQ3C1V8 233 aa17.6■□□□□ 0.41
VSX1-205ENST00000429762 ARSJQ5FYB0 599 aaPredicted RBP17.6■□□□□ 0.41
VSX1-205ENST00000429762 Q8N6K4 173 aa17.6■□□□□ 0.41
VSX1-205ENST00000429762 SAT2Q96F10 170 aaPredicted RBP17.6■□□□□ 0.41
VSX1-205ENST00000429762 A0A0U1RQK1 487 aa17.6■□□□□ 0.41
VSX1-205ENST00000429762 NDUFA3O95167 84 aa17.6■□□□□ 0.41
VSX1-205ENST00000429762 C2orf83Q53S99 150 aa17.6■□□□□ 0.41
VSX1-205ENST00000429762 BTNL8Q6UX41 500 aa17.6■□□□□ 0.41
VSX1-205ENST00000429762 C1orf159Q96HA4 380 aa17.6■□□□□ 0.41
VSX1-205ENST00000429762 PARD6GQ9BYG4 376 aaPredicted RBP17.6■□□□□ 0.41
VSX1-205ENST00000429762 MED9Q9NWA0 146 aa17.6■□□□□ 0.41
VSX1-205ENST00000429762 GCN1Q92616 2671 aaKnown RBP17.6■□□□□ 0.41
VSX1-205ENST00000429762 TRAV20A0A0B4J274 112 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 ANKRD34BA5PLL1 514 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 AKR1C8PQ5T2L2 129 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 P2RX4Q99571 388 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 ZFHX3Q15911 3703 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 TEX22C9J3V5 150 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 AGPAT2O15120 278 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 CNIH1O95406 144 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 MAS1LP35410 378 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 DLK1P80370 383 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 LOXL1Q08397 574 aaPredicted RBP17.59■□□□□ 0.41
VSX1-205ENST00000429762 EBI3Q14213 229 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 C5orf64Q2M2E5 130 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 KLF17Q5JT82 389 aaPredicted RBP17.59■□□□□ 0.41
VSX1-205ENST00000429762 SRSF12Q8WXF0 261 aaKnown RBP17.59■□□□□ 0.41
VSX1-205ENST00000429762 FAM103A1Q9BTL3 118 aaKnown RBP17.59■□□□□ 0.41
VSX1-205ENST00000429762 NPCDR1Q9BY65 106 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 PARP11Q9NR21 331 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 WDR83OSQ9Y284 106 aa17.59■□□□□ 0.41
VSX1-205ENST00000429762 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.58■□□□□ 0.4
VSX1-205ENST00000429762 EIF3GO75821 320 aaKnown RBP eCLIP17.58■□□□□ 0.4
VSX1-205ENST00000429762 TGFAP01135 160 aa17.58■□□□□ 0.4
VSX1-205ENST00000429762 MDKP21741 143 aaPredicted RBP17.58■□□□□ 0.4
VSX1-205ENST00000429762 S100A1P23297 94 aa17.58■□□□□ 0.4
VSX1-205ENST00000429762 BLOC1S1P78537 153 aa17.58■□□□□ 0.4
VSX1-205ENST00000429762 TREML4Q6UXN2 200 aa17.58■□□□□ 0.4
VSX1-205ENST00000429762 SSMEM1Q8WWF3 244 aa17.58■□□□□ 0.4
VSX1-205ENST00000429762 MBD6Q96DN6 1003 aa17.58■□□□□ 0.4
VSX1-205ENST00000429762 PSMG3Q9BT73 122 aaPredicted RBP17.57■□□□□ 0.4
VSX1-205ENST00000429762 INS-IGF2F8WCM5 200 aa17.57■□□□□ 0.4
VSX1-205ENST00000429762 I3L521 148 aa17.57■□□□□ 0.4
VSX1-205ENST00000429762 IGHV3-48P01763 117 aa17.57■□□□□ 0.4
VSX1-205ENST00000429762 FAM106CPP0CH98 169 aa17.57■□□□□ 0.4
VSX1-205ENST00000429762 IGHV4-31P0DP07 118 aa17.57■□□□□ 0.4
VSX1-205ENST00000429762 BRS3P32247 399 aa17.57■□□□□ 0.4
VSX1-205ENST00000429762 ACSM6Q6P461 480 aa17.57■□□□□ 0.4
VSX1-205ENST00000429762 SCAF4O95104 1147 aaKnown RBP17.56■□□□□ 0.4
VSX1-205ENST00000429762 RAB5CP51148 216 aa17.56■□□□□ 0.4
VSX1-205ENST00000429762 AKR1C1Q04828 323 aa17.56■□□□□ 0.4
VSX1-205ENST00000429762 ABHD5Q8WTS1 349 aa17.56■□□□□ 0.4
VSX1-205ENST00000429762 UMAD1C9J7I0 102 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 MFAP2P55001 183 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 RAB2AP61019 212 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 FXYD3Q14802 87 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 MARC2Q969Z3 335 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 MGST2Q99735 147 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 GGACTQ9BVM4 153 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 RPRMQ9NS64 109 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 TRIM77I1YAP6 450 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 SRSF3P84103 164 aaKnown RBP17.55■□□□□ 0.4
VSX1-205ENST00000429762 TMEM249Q2WGJ8 235 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 TMEM219Q86XT9 240 aa17.55■□□□□ 0.4
VSX1-205ENST00000429762 ABCA1O95477 2261 aa17.54■□□□□ 0.4
VSX1-205ENST00000429762 SH2D7A6NKC9 451 aaPredicted RBP17.54■□□□□ 0.4
VSX1-205ENST00000429762 NDPQ00604 133 aa17.54■□□□□ 0.4
VSX1-205ENST00000429762 TOR2AQ5JU69 321 aa17.54■□□□□ 0.4
VSX1-205ENST00000429762 FFAR4Q5NUL3 377 aa17.54■□□□□ 0.4
VSX1-205ENST00000429762 SSX7Q7RTT5 188 aa17.54■□□□□ 0.4
VSX1-205ENST00000429762 HSD17B13Q7Z5P4 300 aaPredicted RBP17.54■□□□□ 0.4
VSX1-205ENST00000429762 Q8N9W7 124 aa17.54■□□□□ 0.4
VSX1-205ENST00000429762 OR2T6Q8NHC8 308 aa17.54■□□□□ 0.4
VSX1-205ENST00000429762 TMEM231Q9H6L2 316 aa17.54■□□□□ 0.4
VSX1-205ENST00000429762 TIMM9Q9Y5J7 89 aa17.54■□□□□ 0.4
VSX1-205ENST00000429762 ZNF709Q8N972 641 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 WFDC11Q8NEX6 87 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 MISP3Q96FF7 219 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 FNDC4Q9H6D8 234 aaPredicted RBP17.53■□□□□ 0.4
VSX1-205ENST00000429762 PRRC2AP48634 2157 aaKnown RBP17.53■□□□□ 0.4
VSX1-205ENST00000429762 IGHV3-21A0A0B4J1V1 117 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 DEFA4P12838 97 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 CD69Q07108 199 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 GAMTQ14353 236 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 ZNF726P1Q15940 193 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 SLC16A13Q7RTY0 426 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 CENPVQ7Z7K6 275 aaPredicted RBP17.53■□□□□ 0.4
VSX1-205ENST00000429762 NPVFQ9HCQ7 196 aa17.53■□□□□ 0.4
VSX1-205ENST00000429762 TSPAN15O95858 294 aa17.52■□□□□ 0.4
VSX1-205ENST00000429762 GATA3P23771 443 aa17.52■□□□□ 0.4
VSX1-205ENST00000429762 OPRK1P41145 380 aa17.52■□□□□ 0.4
VSX1-205ENST00000429762 SUB1P53999 127 aaKnown RBP eCLIP17.52■□□□□ 0.4
VSX1-205ENST00000429762 CX3CL1P78423 397 aa17.52■□□□□ 0.4
VSX1-205ENST00000429762 FAM96BQ9Y3D0 163 aa17.52■□□□□ 0.4
VSX1-205ENST00000429762 ZANQ9Y493 2812 aa17.52■□□□□ 0.4
VSX1-205ENST00000429762 MDFIC2A0A1B0GVS7 189 aa17.51■□□□□ 0.39
VSX1-205ENST00000429762 CCL20P78556 96 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms