RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 SMAGPQ0VAQ4 97 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 WDR25Q64LD2 544 aaPredicted RBP12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 MYOZ3Q8TDC0 251 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 TMEM170AQ8WVE7 144 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 DCTN5Q9BTE1 182 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 CBLN4Q9NTU7 201 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 RAMP3O60896 148 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 PRSS1P07477 247 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 FCGR2BP31994 310 aaPredicted RBP12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 VN1R17PQ8TDU5 208 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 ZMAT5Q9UDW3 170 aaKnown RBP12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 IGKV1-5P01602 117 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 ATP5G2Q06055 141 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 UQCR10Q9UDW1 63 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 BRWD1Q9NSI6 2320 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 TCRBV4S1A1TA0A5B7 111 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 NDUFS6O75380 124 aaKnown RBP12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 FCER1GP30273 86 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 HGFACQ04756 655 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 FOXF2Q12947 444 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 PLA2G2CQ5R387 149 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 Q8NFD4 153 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 OTORQ9NRC9 128 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 UFC1Q9Y3C8 167 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 UBE2CO00762 179 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 COL5A1-AS1Q5SY13 56 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 STAG3L2P0CL84 134 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 STAG3L3P0CL85 134 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 DDTP30046 118 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 TBR1Q16650 682 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 RBPMS2Q6ZRY4 209 aaKnown RBP12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 RRHO14718 337 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 CGAP01215 116 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 OR9G9P0C7N8 305 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 LOXL3P58215 753 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 IGFL3Q6UXB1 125 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 OR4C5Q8NGB2 326 aa12.3□□□□□ -0.44
AP000550.1-201ENST00000420508 PSPNO60542 156 aa12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 CSN3P07498 182 aa12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 IZUMO1RA6ND01 250 aa12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 SH2D7A6NKC9 451 aaPredicted RBP12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 C9JCJ5 164 aa12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 SIAH2O43255 324 aa12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 SRSF3P84103 164 aaKnown RBP12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 SPANXN1Q5VSR9 72 aa12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 TCF24Q7RTU0 167 aa12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 CIARTQ8N365 385 aaPredicted RBP12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 ASXL3Q9C0F0 2248 aa12.29□□□□□ -0.44
AP000550.1-201ENST00000420508 F5H697 171 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 DLX6P56179 175 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 NBR2O15453 112 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 DKK1O94907 266 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 SRIP30626 198 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 FAM106AQ4KMX7 169 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 C16orf92Q96LL3 132 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 HEATR5AQ86XA9 2040 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 SCO2A0A1W2PP80 73 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 LEPROTL1O95214 131 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 APELAP0DMC3 54 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 ATP5G3P48201 142 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 GTF2H5Q6ZYL4 71 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 TMEM167AQ8TBQ9 72 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 ZDBF2Q9HCK1 2354 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 FAM186AA6NE01 2351 aa12.28□□□□□ -0.44
AP000550.1-201ENST00000420508 COLCA2A8K830 154 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 OR2J3O76001 311 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 IL4P05112 153 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 COX6B1P14854 86 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 MDKP21741 143 aaPredicted RBP12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 NPPCP23582 126 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 GATA4P43694 442 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 RNF144BQ7Z419 303 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 CD177Q8N6Q3 437 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 LINC01560Q8TB33 94 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 ARPC1AQ92747 370 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 SRSF8Q9BRL6 282 aaKnown RBP12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 ATG101Q9BSB4 218 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 LRRK1Q38SD2 2015 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 TREML4Q6UXN2 200 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 OR10AG1Q8NH19 301 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 C21orf62Q9NYP8 219 aa12.27□□□□□ -0.44
AP000550.1-201ENST00000420508 MIR17HGQ75NE6 70 aa12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 SYT8Q8NBV8 401 aa12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 RP1L1Q8IWN7 2480 aaPredicted RBP12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 PLAUP00749 431 aa12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 TWIST1Q15672 202 aa12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 FAM201AQ5SY85 155 aa12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 C12orf54Q6X4T0 127 aa12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 ZNF524Q96C55 264 aa12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 RPP21Q9H633 154 aaKnown RBP12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 PAM16Q9Y3D7 125 aa12.27□□□□□ -0.45
AP000550.1-201ENST00000420508 EFNB3Q15768 340 aa12.26□□□□□ -0.45
AP000550.1-201ENST00000420508 COQ2Q96H96 371 aa12.26□□□□□ -0.45
AP000550.1-201ENST00000420508 GGTLC1Q9BX51 225 aa12.26□□□□□ -0.45
AP000550.1-201ENST00000420508 IFITM10A6NMD0 228 aa12.26□□□□□ -0.45
AP000550.1-201ENST00000420508 GCSHP23434 173 aa12.26□□□□□ -0.45
AP000550.1-201ENST00000420508 ZNF137PP52743 207 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms