RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FAM214BQ7L5A3 538 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 NUP35Q8NFH5 326 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 TRIB1Q96RU8 372 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 SSBP3Q9BWW4 388 aaPredicted RBP6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 PHF7Q9BWX1 381 aaPredicted RBP6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 OR51B2Q9Y5P1 312 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 IGHV1-24A0A0C4DH33 117 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 SH2D7A6NKC9 451 aaPredicted RBP6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 PRR20EP86478 221 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 PRR20CP86479 221 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 PRR20DP86480 221 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 PRR20BP86481 221 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 PRR20AP86496 221 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 SAMD13Q5VXD3 122 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 SYT13Q7L8C5 426 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 GGNQ86UU5 652 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 OR52E5Q8NH55 327 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 FAM90A9PA6NNJ1 464 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 HBZP02008 142 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 CD46P15529 392 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 B3GALT5-AS1P59052 145 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 RAB30Q15771 203 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 GABRA6Q16445 453 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 LINC00173Q6ZV60 143 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 CLUHP3Q96NS8 147 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 HSD17B10Q99714 261 aaKnown RBP6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 PRRG4Q9BZD6 226 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 IGFLR1Q9H665 355 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 C12orf77C9JDV5 145 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 CXCL13O43927 109 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 LEPROTL1O95214 131 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 LINC00205P59089 165 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 RAB31Q13636 194 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 C2orf91Q6ZV80 131 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 FAM231DQ6ZW35 169 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 OR1N2Q8NGR9 330 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 CHCHD1Q96BP2 118 aaKnown RBP6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 SSBP4Q9BWG4 385 aaPredicted RBP6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 ZNF355PQ9NSJ1 428 aa6.61□□□□□ -1.35
HMGXB4-202ENST00000418170 FREM1Q5H8C1 2179 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 SP9P0CG40 484 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 SRFP11831 508 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 NHLH1Q02575 133 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 ABHD12Q8N2K0 398 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 ZNF503Q96F45 646 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 FNDC4Q9H6D8 234 aaPredicted RBP6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 WDR54Q9H977 334 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 A0A1W2PR77 199 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 PPIAL4DF5H284 164 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 K7EP34 96 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 ACTL6BO94805 426 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 IGHV3-9P01782 118 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 PPIAL4GP0DN37 164 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 ERVK11-1P61568 191 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 Q8IYB0 196 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 GCM1Q9NP62 436 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 CACNA1DQ01668 2161 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 AHRRA9YTQ3 701 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 SCGB1A1P11684 91 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 GDF1P27539 372 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 ZNF146Q15072 292 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 WIPI1Q5MNZ9 446 aaPredicted RBP6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 PRAMEF5Q5TYX0 476 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 PRAMEF6Q5VXH4 476 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 ATP5L2Q7Z4Y8 100 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 SMRP1Q8NCR6 262 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 OR4A16Q8NH70 328 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 GRAMD2BQ96HH9 432 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 JMJD8Q96S16 334 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 PMCHL2Q9BQD1 86 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 SMPXQ9UHP9 88 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 DUSP13Q9UII6 198 aa6.6□□□□□ -1.35
HMGXB4-202ENST00000418170 A0A1B0GXF2 115 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 A0A1W2PRE2 83 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 TMEM30CPA0ZSE6 113 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 CELA2AP08217 269 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 COX8AP10176 69 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 HTR1DP28221 377 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 TMEM97Q5BJF2 176 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 NHLRC2Q8NBF2 726 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 A0A096LPE4 126 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 A0A1W2PPZ6 126 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 H3BRM9 83 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 SMPD2O60906 423 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 SMIM17P0DL12 118 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 CAMPP49913 170 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 H1FXQ92522 213 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 SNRNP40Q96DI7 357 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 AP1S3Q96PC3 154 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 PLEKHA3Q9HB20 300 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 ZNF503-AS2A6NEH8 195 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 OOEPA6NGQ2 149 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 SCRG1O75711 98 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 OR5AL1P0C617 328 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 DUTP33316 252 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 RTL8BQ17RB0 113 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 ASPHD1Q5U4P2 390 aa6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 YRDCQ86U90 279 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-202ENST00000418170 BPIFA4PQ86YQ2 179 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms