RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 UPK1BO75841 260 aa17.85■□□□□ 0.45
SMARCB1-205ENST00000417137 ERHP84090 104 aaKnown RBP17.85■□□□□ 0.45
SMARCB1-205ENST00000417137 PPP1R1AQ13522 171 aa17.85■□□□□ 0.45
SMARCB1-205ENST00000417137 C15orf32Q32M92 178 aa17.85■□□□□ 0.45
SMARCB1-205ENST00000417137 PRR13Q9NZ81 148 aa17.85■□□□□ 0.45
SMARCB1-205ENST00000417137 FLVCR2Q9UPI3 526 aa17.85■□□□□ 0.45
SMARCB1-205ENST00000417137 GPR61Q9BZJ8 451 aa17.84■□□□□ 0.45
SMARCB1-205ENST00000417137 ENY2Q9NPA8 101 aa17.84■□□□□ 0.45
SMARCB1-205ENST00000417137 PEF1Q9UBV8 284 aaKnown RBP17.84■□□□□ 0.45
SMARCB1-205ENST00000417137 CACNG5Q9UF02 275 aa17.84■□□□□ 0.45
SMARCB1-205ENST00000417137 IGLV11-55A0A075B6I3 123 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 ANKRD34BA5PLL1 514 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 SULT1A3P0DMM9 295 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 SULT1A4P0DMN0 295 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 ZP3P21754 424 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 SPCS3P61009 180 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 DEFA5Q01523 94 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 ASAH1Q13510 395 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 EXOSC2Q13868 293 aaKnown RBP17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 SLC25A24Q6NUK1 477 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 Q6ZRM9 215 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 C19orf35Q6ZS72 473 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 LYZL2Q7Z4W2 148 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 LRTM2Q8N967 370 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 OR52E5Q8NH55 327 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 CXorf58Q96LI9 332 aa17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 F11RQ9Y624 299 aaKnown RBP17.83■□□□□ 0.44
SMARCB1-205ENST00000417137 IGHV4OR15-8A0A075B7B6 117 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 A0A087WW49 117 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 FAM240BA0A1B0GVZ2 78 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 NDUFB8O95169 186 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 TCRBP04435 133 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 OR4E1P0C645 316 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 AARDQ4LEZ3 155 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 C4orf46Q504U0 113 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 OR2C3Q8N628 320 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 EEF1AKMT3Q96AZ1 226 aa17.82■□□□□ 0.44
SMARCB1-205ENST00000417137 C9orf170A2RU37 121 aa17.81■□□□□ 0.44
SMARCB1-205ENST00000417137 INS-IGF2F8WCM5 200 aa17.81■□□□□ 0.44
SMARCB1-205ENST00000417137 HLA-AP01891 365 aaKnown RBP17.81■□□□□ 0.44
SMARCB1-205ENST00000417137 IGLL1P15814 213 aa17.81■□□□□ 0.44
SMARCB1-205ENST00000417137 SNCAP37840 140 aa17.81■□□□□ 0.44
SMARCB1-205ENST00000417137 ANKRD55Q3KP44 614 aa17.81■□□□□ 0.44
SMARCB1-205ENST00000417137 OR1P1Q8NH06 330 aa17.81■□□□□ 0.44
SMARCB1-205ENST00000417137 C20orf85Q9H1P6 137 aa17.81■□□□□ 0.44
SMARCB1-205ENST00000417137 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 TRBV7-1A0A0A6YYK4 115 aa17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 A0A1B0GU03 582 aa17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 ANXA7P20073 488 aaKnown RBP17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 HOXA1P49639 335 aaPredicted RBP17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 SMCO1Q147U7 214 aa17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 NMSQ5H8A3 153 aa17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 LYG2Q86SG7 212 aa17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 COQ8AQ8NI60 647 aa17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 TBC1D24Q9ULP9 559 aa17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 TMED3Q9Y3Q3 217 aa17.8■□□□□ 0.44
SMARCB1-205ENST00000417137 VWFP04275 2813 aa17.79■□□□□ 0.44
SMARCB1-205ENST00000417137 SUB1P53999 127 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMARCB1-205ENST00000417137 TATDN3Q17R31 274 aa17.79■□□□□ 0.44
SMARCB1-205ENST00000417137 OXLD1Q5BKU9 147 aa17.79■□□□□ 0.44
SMARCB1-205ENST00000417137 SPINK9Q5DT21 86 aa17.79■□□□□ 0.44
SMARCB1-205ENST00000417137 SAMD5Q5TGI4 173 aa17.79■□□□□ 0.44
SMARCB1-205ENST00000417137 ZNF114Q8NC26 417 aa17.79■□□□□ 0.44
SMARCB1-205ENST00000417137 VN1R17PQ8TDU5 208 aa17.79■□□□□ 0.44
SMARCB1-205ENST00000417137 DCUN1D4Q92564 292 aa17.79■□□□□ 0.44
SMARCB1-205ENST00000417137 G3V4G9 280 aa17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 OVOL1O14753 267 aa17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 HOXD3P31249 432 aaPredicted RBP17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 SLURP1P55000 103 aa17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 DEFA1P59665 94 aa17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 DEFA3P59666 94 aa17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 DHRS2Q13268 280 aa17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 PDLIM3Q53GG5 364 aaPredicted RBP17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 DLX4Q92988 240 aaPredicted RBP17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 NUDT15Q9NV35 164 aa17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 DMRT1Q9Y5R6 373 aa17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 PKD1L1Q8TDX9 2849 aa17.78■□□□□ 0.44
SMARCB1-205ENST00000417137 SLC25A6P12236 298 aa17.77■□□□□ 0.44
SMARCB1-205ENST00000417137 RPEL1Q2QD12 228 aa17.77■□□□□ 0.44
SMARCB1-205ENST00000417137 OR1S1Q8NH92 325 aa17.77■□□□□ 0.44
SMARCB1-205ENST00000417137 TRAV6A0A075B6T7 132 aa17.76■□□□□ 0.43
SMARCB1-205ENST00000417137 CEBPZOSA8MTT3 80 aa17.76■□□□□ 0.43
SMARCB1-205ENST00000417137 H2AFB2P0C5Z0 115 aa17.76■□□□□ 0.43
SMARCB1-205ENST00000417137 ENKURQ8TC29 256 aa17.76■□□□□ 0.43
SMARCB1-205ENST00000417137 HEYLQ9NQ87 328 aaPredicted RBP17.76■□□□□ 0.43
SMARCB1-205ENST00000417137 IFNA21P01568 189 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 TRBV12-3P01733 135 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 HOXB5P09067 269 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 MFAP2P55001 183 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 IFITM3Q01628 133 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 C9orf66Q5T8R8 295 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 CLEC19AQ6UXS0 136 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 C1QL4Q86Z23 238 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 MISP3Q96FF7 219 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 HIPK2Q9H2X6 1198 aa17.75■□□□□ 0.43
SMARCB1-205ENST00000417137 MFSD2BA6NFX1 497 aa17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 SEC14L6B5MCN3 397 aa17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 GGCTO75223 188 aaKnown RBP17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 IGHV3-23P01764 117 aa17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 CLEC3BP05452 202 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms