RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 C15orf61A6NNL5 157 aa11.02□□□□□ -0.65
CBX3-203ENST00000409747 TSPAN4O14817 238 aa11.02□□□□□ -0.65
CBX3-203ENST00000409747 PHLDA2Q53GA4 152 aa11.02□□□□□ -0.65
CBX3-203ENST00000409747 SCARB1Q8WTV0 552 aa11.02□□□□□ -0.65
CBX3-203ENST00000409747 APOC4P55056 127 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 Q56UQ5 140 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 TBC1D26Q86UD7 250 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 SNX29P2Q8IUI4 249 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 UBAC2Q8NBM4 344 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 OR1P1Q8NH06 330 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 DNAH1Q9P2D7 4330 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 K7EMT4 169 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 MFAP2P55001 183 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 UCP3P55916 312 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 NCS1P62166 190 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 RELQ04864 619 aaPredicted RBP11.01□□□□□ -0.65
CBX3-203ENST00000409747 H2BFWTQ7Z2G1 175 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 OR4A16Q8NH70 328 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 C20orf24Q9BUV8 137 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 FUNDC2Q9BWH2 189 aa11.01□□□□□ -0.65
CBX3-203ENST00000409747 OR4C46A6NHA9 309 aa11□□□□□ -0.65
CBX3-203ENST00000409747 C15orf62A8K5M9 175 aa11□□□□□ -0.65
CBX3-203ENST00000409747 K7EIM0 57 aa11□□□□□ -0.65
CBX3-203ENST00000409747 CHRDL1Q9BU40 450 aa11□□□□□ -0.65
CBX3-203ENST00000409747 IGHV3-21A0A0B4J1V1 117 aa10.99□□□□□ -0.65
CBX3-203ENST00000409747 NUPL2O15504 423 aaKnown RBP10.99□□□□□ -0.65
CBX3-203ENST00000409747 RORCP51449 518 aa10.99□□□□□ -0.65
CBX3-203ENST00000409747 VBP1P61758 197 aa10.99□□□□□ -0.65
CBX3-203ENST00000409747 MZT2AQ6P582 158 aa10.99□□□□□ -0.65
CBX3-203ENST00000409747 AP3S1Q92572 193 aa10.99□□□□□ -0.65
CBX3-203ENST00000409747 SEC22AQ96IW7 307 aa10.99□□□□□ -0.65
CBX3-203ENST00000409747 OVOL2Q9BRP0 275 aa10.99□□□□□ -0.65
CBX3-203ENST00000409747 TP53TG1Q9Y2A0 90 aa10.99□□□□□ -0.65
CBX3-203ENST00000409747 DBX1A6NMT0 343 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 F8W735 103 aaPredicted RBP10.98□□□□□ -0.65
CBX3-203ENST00000409747 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
CBX3-203ENST00000409747 ADMP35318 185 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 ZNF114Q8NC26 417 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 ZNF486Q96H40 463 aaPredicted RBP10.98□□□□□ -0.65
CBX3-203ENST00000409747 TXN2Q99757 166 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 UBE2CO00762 179 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 HPGDSO60760 199 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 ELK1P19419 428 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 MFAP4P55083 255 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 PRCDQ00LT1 54 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 Q6ZWC4 215 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 MRGPRFQ96AM1 343 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 MISP3Q96FF7 219 aa10.98□□□□□ -0.65
CBX3-203ENST00000409747 KIR2DL5BA0A0G2JN68 375 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 KIR2DL5BA0A0G2JPC4 375 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 FAM25AB3EWG3 89 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 FAM25CB3EWG5 89 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 FAM25GB3EWG6 89 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 ATG12O94817 140 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 CTSGP08311 255 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 TBPP20226 339 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 RND3P61587 244 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 HSPE1P61604 102 aaKnown RBP10.97□□□□□ -0.65
CBX3-203ENST00000409747 ERHP84090 104 aaKnown RBP10.97□□□□□ -0.65
CBX3-203ENST00000409747 RNASE10Q5GAN6 216 aaKnown RBP10.97□□□□□ -0.65
CBX3-203ENST00000409747 WFDC3Q8IUB2 231 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 KIR2DL5AQ8N109 375 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 KIR2DL5BQ8NHK3 375 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 C6orf62Q9GZU0 229 aaPredicted RBP10.97□□□□□ -0.65
CBX3-203ENST00000409747 UBQLN2Q9UHD9 624 aa10.97□□□□□ -0.65
CBX3-203ENST00000409747 PLECQ15149 4684 aaKnown RBP10.97□□□□□ -0.65
CBX3-203ENST00000409747 PGAM2P15259 253 aa10.96□□□□□ -0.65
CBX3-203ENST00000409747 BMI1P35226 326 aa10.96□□□□□ -0.65
CBX3-203ENST00000409747 ARRDC1Q8N5I2 433 aa10.96□□□□□ -0.65
CBX3-203ENST00000409747 STPG3Q8N7X2 389 aa10.96□□□□□ -0.65
CBX3-203ENST00000409747 C15orf40Q8WUR7 153 aa10.96□□□□□ -0.65
CBX3-203ENST00000409747 SMPXQ9UHP9 88 aa10.96□□□□□ -0.65
CBX3-203ENST00000409747 IGHV3OR16-8A0A075B7F1 116 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 I3L2K1 104 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 M0QYG6 137 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 SPRY2O43597 315 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 ZNF207O43670 478 aaKnown RBP10.95□□□□□ -0.66
CBX3-203ENST00000409747 GNG7O60262 68 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 YIF1AO95070 293 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 MT-CO2P00403 227 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 IGKV1-39P01597 117 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 IGKV1D-39P04432 117 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 CTSDP07339 412 aaPredicted RBP10.95□□□□□ -0.66
CBX3-203ENST00000409747 CMC4P56277 68 aaPredicted RBP10.95□□□□□ -0.66
CBX3-203ENST00000409747 ODF3L2Q3SX64 289 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 OR10C1Q96KK4 312 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 TMEM116Q8NCL8 245 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 PINX1Q96BK5 328 aaKnown RBP10.95□□□□□ -0.66
CBX3-203ENST00000409747 GALNT14Q96FL9 552 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 GINS3Q9BRX5 216 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 RHPN1-AS1Q9BWJ2 59 aa10.95□□□□□ -0.66
CBX3-203ENST00000409747 NXF2Q9GZY0 626 aaKnown RBP10.95□□□□□ -0.66
CBX3-203ENST00000409747 CD5P06127 495 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 ZNF182P17025 639 aaPredicted RBP10.94□□□□□ -0.66
CBX3-203ENST00000409747 SNCAP37840 140 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 AKR1C2P52895 323 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 PIGPP57054 158 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 TNFRSF9Q07011 255 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 DEFB135Q30KP9 77 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms