RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 COL9A1P20849 921 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 CFPP27918 469 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 FOXL1Q12952 345 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 C16orf54Q6UWD8 224 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 RPS27LQ71UM5 84 aaKnown RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 GAPTQ8N292 157 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 WFDC5Q8TCV5 224 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 TM2D2Q9BX73 214 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 C1QTNF5Q9BXJ0 243 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 WNT10AQ9GZT5 417 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 CYSLTR1Q9Y271 337 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 TCRBV4S1A1TA0A5B7 111 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 NDUFS6O75380 124 aaKnown RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 LINC00869P0C866 280 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 BSXQ3C1V8 233 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 TMEM255AQ5JRV8 349 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 OR11H1Q8NG94 326 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 OR11H2Q8NH07 326 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 HIST1H4GQ99525 98 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 NCOR1P1Q9H4R4 102 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 PGPEP1Q9NXJ5 209 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 ACACBO00763 2458 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 MUC22E2RYF6 1773 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 IGHV3-15A0A0B4J1V0 119 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 TRAV21A0A0B4J279 112 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 FAM157AC9JC47 383 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 J3KRW8 73 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 CYB5R3P00387 301 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 C1QCP02747 245 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 PSG1P11464 419 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 DUTP33316 252 aaKnown RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 RPL36AP83881 106 aaKnown RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 RPL36ALQ969Q0 106 aaKnown RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 SRCAPQ6ZRS2 3230 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 A0A087WWC5 75 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 GRIFINA4D1Z8 144 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 YPEL1O60688 119 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 GCM2O75603 506 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 TRGC2P03986 189 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 HOXA5P20719 270 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 PRSS8Q16651 343 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 ALKAL2Q6UX46 152 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 YPEL2Q96QA6 119 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 TMEM30AQ9NV96 361 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 IGLV3-12A0A075B6K2 115 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 OR2H2O95918 312 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 UCP1P25874 307 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 GPR183P32249 361 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 HSPE1P61604 102 aaKnown RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 CCL8P80075 99 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 KIAA0141Q14154 515 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 C9orf139Q6ZV77 190 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 NKAIN4Q8IVV8 208 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 MZB1Q8WU39 189 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 GATA6Q92908 595 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 CHCHD2Q9Y6H1 151 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 PRRC2AP48634 2157 aaKnown RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 A0A1B0GV50 99 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 A0A1W2PPE3 182 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 A0A1W2PPI3 338 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 PSMB11A5LHX3 300 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 C9JQL5 133 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 ITGB1BP1O14713 200 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 LEPROTO15243 131 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 C8orf88P0DMB2 117 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 RND3P61587 244 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 PITX1P78337 314 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 SRSF1Q07955 248 aaKnown RBP eCLIP2.31□□□□□ -2.04
CHD9-202ENST00000398510 PMS2P11Q13670 270 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 FAM78BQ5VT40 261 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 LURAP1LQ8IV03 231 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 FGFBP3Q8TAT2 258 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 SPSB4Q96A44 273 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 KLF12Q9Y4X4 402 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 F8P00451 2351 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 SMIM30A4D0T7 59 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 J3KTA2 159 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 LEPROTL1O95214 131 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 TGFAP01135 160 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 PSG6Q00889 435 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 C1QL3Q5VWW1 255 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 GLIS1Q8NBF1 620 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 LINC00477Q96M19 166 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 GFRA4Q9GZZ7 299 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 A0A1B0GUT8 65 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 IFITM10A6NMD0 228 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 BGLAPP02818 100 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 TRGV3P03979 118 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 GATA4P43694 442 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 C12orf73Q69YU5 71 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 VN1R4Q7Z5H5 301 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 PPP1R27Q86WC6 154 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 OR5AN1Q8NGI8 311 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 ITLN2Q8WWU7 325 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 DLX4Q92988 240 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 SLC25A37Q9NYZ2 338 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 GAGE10A6NGK3 116 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 GGTLC3B5MD39 225 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 HCRTO43612 131 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms