RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 IZUMO4Q1ZYL8 232 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 OR11H7Q8NGC8 314 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 P2RX4Q99571 388 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 MBPP02686 304 aaPredicted RBP10.32□□□□□ -0.76
USP44-202ENST00000393091 TMEM170AQ8WVE7 144 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 NOL4LQ96MY1 436 aaPredicted RBP10.32□□□□□ -0.76
USP44-202ENST00000393091 NSG2Q9Y328 171 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 AREGP15514 252 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 NKX2-1P43699 371 aaPredicted RBP10.32□□□□□ -0.76
USP44-202ENST00000393091 RAB9AP51151 201 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 MFAP2P55001 183 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 TMEM95Q3KNT9 176 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 SPATA3Q8NHX4 192 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 DTD1Q8TEA8 209 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 C4orf3Q8WVX3 66 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 G3V318 75 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 K7EPK0 472 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 OPN1MWP04001 364 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 OPN1MW2P0DN77 364 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 OPN1MW3P0DN78 364 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 SUB1P53999 127 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP44-202ENST00000393091 GNB1P62873 340 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 RPP30P78346 268 aaKnown RBP10.32□□□□□ -0.76
USP44-202ENST00000393091 CXorf66Q5JRM2 361 aaPredicted RBP10.32□□□□□ -0.76
USP44-202ENST00000393091 ZNF343Q6P1L6 599 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 OR5AU1Q8NGC0 362 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 OR10W1Q8NGF6 305 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 OR4X2Q8NGF9 303 aa10.32□□□□□ -0.76
USP44-202ENST00000393091 RNASE11Q8TAA1 199 aaKnown RBP10.32□□□□□ -0.76
USP44-202ENST00000393091 A0A0G2JLM5 398 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 I3L2K1 104 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 DEDDO75618 318 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 SHISA2Q6UWI4 295 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 TMEM14EPQ6UXP3 125 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 GRPEL2Q8TAA5 225 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 MED28Q9H204 178 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 HIPK2Q9H2X6 1198 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 TSSC4Q9Y5U2 329 aaPredicted RBP10.31□□□□□ -0.76
USP44-202ENST00000393091 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 GOSR2O14653 212 aa10.31□□□□□ -0.76
USP44-202ENST00000393091 GPX4P36969 197 aaPredicted RBP10.31□□□□□ -0.76
USP44-202ENST00000393091 RPL23AP62750 156 aaKnown RBP10.31□□□□□ -0.76
USP44-202ENST00000393091 CENPVQ7Z7K6 275 aaPredicted RBP10.31□□□□□ -0.76
USP44-202ENST00000393091 ZNF436Q9C0F3 470 aaPredicted RBP10.31□□□□□ -0.76
USP44-202ENST00000393091 FBN1P35555 2871 aaKnown RBP10.31□□□□□ -0.76
USP44-202ENST00000393091 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.3□□□□□ -0.76
USP44-202ENST00000393091 I3L521 148 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 SLC25A4P12235 298 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 FHL3Q13643 280 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 TRBV7-1A0A0A6YYK4 115 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 SSNA1O43805 119 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 C9orf152Q5JTZ5 239 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 GGACTQ9BVM4 153 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 C15orf62A8K5M9 175 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 IFNA17P01571 189 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 RAP2BP61225 183 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 FCN2Q15485 313 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 ABHD5Q8WTS1 349 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 CACNG8Q8WXS5 425 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 CXorf58Q96LI9 332 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 FAM103A1Q9BTL3 118 aaKnown RBP10.3□□□□□ -0.76
USP44-202ENST00000393091 THYN1Q9P016 225 aa10.3□□□□□ -0.76
USP44-202ENST00000393091 OR13C7P0DN81 318 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 SLC24A4Q8NFF2 622 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 ENY2Q9NPA8 101 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 TNCP24821 2201 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 K7EIM0 57 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 CXCL3P19876 107 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 P2RY1P47900 373 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 HOXA1P49639 335 aaPredicted RBP10.29□□□□□ -0.76
USP44-202ENST00000393091 SRSF2Q01130 221 aaKnown RBP10.29□□□□□ -0.76
USP44-202ENST00000393091 FGL1Q08830 312 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 VWC2Q2TAL6 325 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 ZNF502Q8TBZ5 544 aa10.29□□□□□ -0.76
USP44-202ENST00000393091 MTORP42345 2549 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 LGALS1P09382 135 aaKnown RBP10.28□□□□□ -0.76
USP44-202ENST00000393091 PET100P0DJ07 73 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 RNF126Q9BV68 326 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 LYRM2Q9NU23 88 aaPredicted RBP10.28□□□□□ -0.76
USP44-202ENST00000393091 CCSO14618 274 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 TMEM50AO95807 157 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 ECSCRQ19T08 205 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 GAR1Q9NY12 217 aaKnown RBP10.28□□□□□ -0.76
USP44-202ENST00000393091 G3V3Q6 166 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 RBMXL2O75526 392 aaKnown RBP10.28□□□□□ -0.76
USP44-202ENST00000393091 CD28P10747 220 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 TMEM116Q8NCL8 245 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 ZNF414Q96IQ9 312 aa10.28□□□□□ -0.76
USP44-202ENST00000393091 CMYA5Q8N3K9 4069 aa10.27□□□□□ -0.76
USP44-202ENST00000393091 C5orf51A6NDU8 294 aa10.27□□□□□ -0.77
USP44-202ENST00000393091 E5RGE8 158 aa10.27□□□□□ -0.77
USP44-202ENST00000393091 F8W735 103 aaPredicted RBP10.27□□□□□ -0.77
USP44-202ENST00000393091 ETFRF1Q6IPR1 90 aa10.27□□□□□ -0.77
USP44-202ENST00000393091 TMEM65Q6PI78 240 aa10.27□□□□□ -0.77
USP44-202ENST00000393091 OR4C12Q96R67 309 aa10.27□□□□□ -0.77
USP44-202ENST00000393091 CEBPZOSA8MTT3 80 aa10.27□□□□□ -0.77
USP44-202ENST00000393091 MPC2O95563 127 aa10.27□□□□□ -0.77
USP44-202ENST00000393091 NPY1RP25929 384 aa10.27□□□□□ -0.77
USP44-202ENST00000393091 TCTE3Q8IZS6 198 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms