RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 RAB19A4D1S5 217 aa16.21■□□□□ 0.18
CPNE9-202ENST00000383831 NUDT19A8MXV4 375 aa16.21■□□□□ 0.18
CPNE9-202ENST00000383831 RUSC1-AS1Q66K80 236 aa16.21■□□□□ 0.18
CPNE9-202ENST00000383831 Q8N6K4 173 aa16.21■□□□□ 0.18
CPNE9-202ENST00000383831 KIAA1456Q9P272 454 aa16.21■□□□□ 0.18
CPNE9-202ENST00000383831 IGHV1-69DA0A0B4J2H0 117 aa16.2■□□□□ 0.18
CPNE9-202ENST00000383831 IGHV1-69P01742 117 aa16.2■□□□□ 0.18
CPNE9-202ENST00000383831 ELLP55199 621 aaPredicted RBP16.2■□□□□ 0.18
CPNE9-202ENST00000383831 DPPA3Q6W0C5 159 aa16.2■□□□□ 0.18
CPNE9-202ENST00000383831 TRAV40A0A0B4J280 105 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 AGPAT2O15120 278 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 TSPAN15O95858 294 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 REG1AP05451 166 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 FAM120AOSQ5T036 256 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 P2RX4Q99571 388 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 C7orf69Q9H7B7 122 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 RPRMQ9NS64 109 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 HIF1ANQ9NWT6 349 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 VPS13CQ709C8 3753 aa16.19■□□□□ 0.18
CPNE9-202ENST00000383831 TEX22C9J3V5 150 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 AREGP15514 252 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 TMEM11P17152 192 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 C5orf64Q2M2E5 130 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 ACSM6Q6P461 480 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 SRSF12Q8WXF0 261 aaKnown RBP16.18■□□□□ 0.18
CPNE9-202ENST00000383831 NAV3Q8IVL0 2385 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 A0A1B0GV50 99 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 SRSF3P84103 164 aaKnown RBP16.18■□□□□ 0.18
CPNE9-202ENST00000383831 TMEM41BQ5BJD5 291 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 UQCC3Q6UW78 93 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 MRPL41Q8IXM3 137 aaKnown RBP16.18■□□□□ 0.18
CPNE9-202ENST00000383831 ZNF709Q8N972 641 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 LINC00052Q96N35 136 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 NPVFQ9HCQ7 196 aa16.18■□□□□ 0.18
CPNE9-202ENST00000383831 TRAV20A0A0B4J274 112 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 FNDC10F2Z333 226 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 C17orf112F2Z3M2 114 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 MPDU1O75352 247 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 H2AFB1P0C5Y9 115 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 FAM106CPP0CH98 169 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 APELAP0DMC3 54 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 BRS3P32247 399 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 Q5PR19 223 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 BRD3OSQ6XYD6 125 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 MGST2Q99735 147 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 LSM4Q9Y4Z0 139 aaKnown RBP16.17■□□□□ 0.18
CPNE9-202ENST00000383831 CSMD2Q7Z408 3487 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 CENPEQ02224 2701 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 CELSR2Q9HCU4 2923 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 ABCA12Q86UK0 2595 aa16.17■□□□□ 0.18
CPNE9-202ENST00000383831 RNF223E7ERA6 249 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 IGHV4-38-2P0DP08 117 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 SUB1P53999 127 aaKnown RBP eCLIP16.16■□□□□ 0.18
CPNE9-202ENST00000383831 RAB2AP61019 212 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 AKR1C1Q04828 323 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 MLANAQ16655 118 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 FFAR4Q5NUL3 377 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 SPSB3Q6PJ21 355 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 LINC01356Q8N9X3 169 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 MAPK1IP1LQ8NDC0 245 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 FAM210AQ96ND0 272 aa16.16■□□□□ 0.18
CPNE9-202ENST00000383831 NCBP2LA6PVI3 153 aaKnown RBP16.15■□□□□ 0.18
CPNE9-202ENST00000383831 CNIH1O95406 144 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 CD69Q07108 199 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 LOXL1Q08397 574 aaPredicted RBP16.15■□□□□ 0.18
CPNE9-202ENST00000383831 ZNF726P1Q15940 193 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 ZNF114Q8NC26 417 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 BPIFCQ8NFQ6 507 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 MBD6Q96DN6 1003 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 ZP3P21754 424 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 GATA3P23771 443 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 TEPPQ6URK8 271 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 C19orf35Q6ZS72 473 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 SSX7Q7RTT5 188 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 SSMEM1Q8WWF3 244 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 GGTLC1Q9BX51 225 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 TMEM231Q9H6L2 316 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 FAM96BQ9Y3D0 163 aa16.15■□□□□ 0.18
CPNE9-202ENST00000383831 GAMTQ14353 236 aa16.14■□□□□ 0.17
CPNE9-202ENST00000383831 PVRIGQ6DKI7 326 aa16.14■□□□□ 0.17
CPNE9-202ENST00000383831 SLC16A13Q7RTY0 426 aa16.14■□□□□ 0.17
CPNE9-202ENST00000383831 COMMD1Q8N668 190 aa16.14■□□□□ 0.17
CPNE9-202ENST00000383831 RNASEH2CQ8TDP1 164 aaKnown RBP16.14■□□□□ 0.17
CPNE9-202ENST00000383831 SFT2D1Q8WV19 159 aa16.14■□□□□ 0.17
CPNE9-202ENST00000383831 RCC1LQ96I51 464 aaKnown RBP16.14■□□□□ 0.17
CPNE9-202ENST00000383831 AVPP01185 164 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 GPX4P36969 197 aaPredicted RBP16.13■□□□□ 0.17
CPNE9-202ENST00000383831 OPRK1P41145 380 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 MFAP2P55001 183 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 CCL20P78556 96 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 FXYD3Q14802 87 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 RPP25LQ8N5L8 163 aaKnown RBP16.13■□□□□ 0.17
CPNE9-202ENST00000383831 FNDC4Q9H6D8 234 aaPredicted RBP16.13■□□□□ 0.17
CPNE9-202ENST00000383831 NAV2Q8IVL1 2488 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 A0A0U1RQK1 487 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 KRBOX1C9JBD0 128 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 MBP02144 154 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 TMEM144Q7Z5S9 345 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 KRTAP1-3Q8IUG1 177 aa16.13■□□□□ 0.17
CPNE9-202ENST00000383831 Q8N9W7 124 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms