RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 RAB31Q13636 194 aa14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 PSG5Q15238 335 aa14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 PRSS8Q16651 343 aa14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 RAB24Q969Q5 203 aa14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 P2RX4Q99571 388 aa14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 TPSG1Q9NRR2 321 aa14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 PXMP4Q9Y6I8 212 aa14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 PLXNB1O43157 2135 aa14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 TAGLN2P37802 199 aaKnown RBP14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 CEACAM3P40198 252 aa14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 RPL29P47914 159 aaKnown RBP14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 PAX2Q02962 417 aa14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 HABP2Q14520 560 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 LDLRAD2Q5SZI1 272 aa14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 TMEM144Q7Z5S9 345 aa14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 CACNG8Q8WXS5 425 aa14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 VAX2Q9UIW0 290 aa14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 SIGLEC9Q9Y336 463 aa14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 KLF2Q9Y5W3 355 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 NAV2Q8IVL1 2488 aa14.47□□□□□ -0.09
HLA-DQB1-201ENST00000374943 ZFP92A6NM28 416 aa14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 NUPL2O15504 423 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 ZFP36P26651 326 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 GPX4P36969 197 aaPredicted RBP14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 WT1-ASQ06250 92 aa14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 CD69Q07108 199 aa14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 C10orf55Q5SWW7 151 aa14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 RBMS3Q6XE24 437 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 MRPL41Q8IXM3 137 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 RNASEH2CQ8TDP1 164 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB1-201ENST00000374943 SUB1P53999 127 aaKnown RBP eCLIP14.46□□□□□ -0.1
HLA-DQB1-201ENST00000374943 MIC13Q5XKP0 118 aa14.46□□□□□ -0.1
HLA-DQB1-201ENST00000374943 CYB561D1Q8N8Q1 229 aa14.46□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SPOCK3Q9BQ16 436 aa14.46□□□□□ -0.1
HLA-DQB1-201ENST00000374943 MANBALQ9NQG1 85 aa14.46□□□□□ -0.1
HLA-DQB1-201ENST00000374943 TSPAN4O14817 238 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 VENTXO95231 258 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 CNTFRP26992 372 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PRR20EP86478 221 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PRR20CP86479 221 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PRR20DP86480 221 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PRR20BP86481 221 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PRR20AP86496 221 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 KLRD1Q13241 179 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 RHEBQ15382 184 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 AWAT1Q58HT5 328 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PVRIGQ6DKI7 326 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 ZNF114Q8NC26 417 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 CFHR4Q92496 578 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SIRPDQ9H106 197 aa14.45□□□□□ -0.1
HLA-DQB1-201ENST00000374943 IGHV2-70DA0A0C4DH43 119 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 TIMM23O14925 209 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 COMPP49747 757 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 B2MP61769 119 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 LMO4P61968 165 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 GAMTQ14353 236 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 GCSAMLQ5JQS6 135 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 TMEM88Q6PEY1 159 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 VMO1Q7Z5L0 202 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 CBLN2Q8IUK8 224 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 STPG3Q8N7X2 389 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 BPESC1Q9GZL8 116 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 HECTD1Q9ULT8 2610 aa14.44□□□□□ -0.1
HLA-DQB1-201ENST00000374943 IGLC7A0M8Q6 106 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 OOSP1A8MZH6 123 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 IGHV4-39P01824 125 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 FBP1P09467 338 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 RPL27AP46776 148 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PSMB3P49720 205 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PDLIM4P50479 330 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SLC16A13Q7RTY0 426 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PPP1R27Q86WC6 154 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 METTL1Q9UBP6 276 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SLC45A2Q9UMX9 530 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 FLNCQ14315 2725 aa14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 USP9XQ93008 2570 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQB1-201ENST00000374943 A0A1W2PPV4 95 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 HMGB3O15347 200 aaKnown RBP14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 EIF3GO75821 320 aaKnown RBP eCLIP14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 ACTL6BO94805 426 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 HOXB4P17483 251 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 MINOS1Q5TGZ0 78 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 FAM90A2PQ658T7 463 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SLC35E3Q7Z769 313 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SSMEM1Q8WWF3 244 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 MINOS1-NBL1R4GNA1 71 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 TACC2O95359 2948 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 WNK2Q9Y3S1 2297 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 C7orf77A4D0Y5 90 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 M0R036 132 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 RNF224P0DH78 156 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 PAX6P26367 422 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 MEF2BQ02080 365 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 TNXAQ16473 311 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SLC35E1Q96K37 410 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 TMPRSS5Q9H3S3 457 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 SMCO4Q9NRQ5 59 aa14.42□□□□□ -0.1
HLA-DQB1-201ENST00000374943 AKAP6Q13023 2319 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 IGKV1OR2-108A0A075B7D4 117 aa14.41□□□□□ -0.1
HLA-DQB1-201ENST00000374943 H3BQ15 152 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms