RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ZNF525Q8N782 197 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF114Q8NC26 417 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 OR8B12Q8NGG6 310 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 OR10X1Q8NGY0 326 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 GATAD1Q8WUU5 269 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 C19orf24Q9BVV8 132 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 A0A1W2PPM0 123 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 OR4C46A6NHA9 309 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 CRXO43186 299 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-203ENST00000372232 IGKV1D-33P01593 117 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 IGKV1-33P01594 117 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 IGFBP2P18065 325 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 ID1P41134 155 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 OR3A4PP47883 348 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 GNB1P62873 340 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF585BQ52M93 769 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 C10orf35Q96D05 121 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 CITED2Q99967 270 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM222Q9H0R3 208 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 NECAP2Q9NVZ3 263 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 TIMM9Q9Y5J7 89 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 IGHV3-15A0A0B4J1V0 119 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 SLC17A3O00476 420 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 PAGE4O60829 102 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 CCL1P22362 96 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 ACP1P24666 158 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 HTR1DP28221 377 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM97Q5BJF2 176 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 C10orf128Q5T292 105 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF841Q6ZN19 808 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 OR5AS1Q8N127 324 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 C11orf44Q8N8P7 122 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM105Q8N8V8 129 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM116Q8NCL8 245 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 OR51T1Q8NGJ9 327 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM54Q969K7 222 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 LSM10Q969L4 123 aaKnown RBP7.34□□□□□ -1.23
ATG4A-203ENST00000372232 PMCHL2Q9BQD1 86 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 SRSF8Q9BRL6 282 aaKnown RBP7.34□□□□□ -1.23
ATG4A-203ENST00000372232 MS4A6AQ9H2W1 248 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 SERTAD4Q9NUC0 356 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 NAT8BQ9UHF3 227 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 MCTS1Q9ULC4 181 aaKnown RBP7.34□□□□□ -1.23
ATG4A-203ENST00000372232 FREM2Q5SZK8 3169 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 VWC2LB2RUY7 222 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 C11orf94C9JXX5 98 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 BMPR1BO00238 502 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 FRMD6-AS1P0C7T7 363 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 USF1P22415 310 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-203ENST00000372232 BLVRBP30043 206 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-203ENST00000372232 SRIP30626 198 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 GRB2P62993 217 aaKnown RBP7.34□□□□□ -1.23
ATG4A-203ENST00000372232 SRSF6Q13247 344 aaKnown RBP7.34□□□□□ -1.23
ATG4A-203ENST00000372232 LPAL2Q16609 132 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 NMSQ5H8A3 153 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF562Q6V9R5 426 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM136Q6ZRR5 245 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 C2orf91Q6ZV80 131 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 CITED1Q99966 193 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 QTRT1Q9BXR0 403 aaKnown RBP7.34□□□□□ -1.23
ATG4A-203ENST00000372232 RAB1BQ9H0U4 201 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 SPANXB1Q9NS25 103 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-203ENST00000372232 SELENOKQ9Y6D0 94 aa7.34□□□□□ -1.23
ATG4A-203ENST00000372232 SDK2Q58EX2 2172 aa7.34□□□□□ -1.24
ATG4A-203ENST00000372232 A0A0J9YW62 118 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 C3orf85A0A1B0GTC6 90 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 HIST1H1EP10412 219 aaKnown RBP7.33□□□□□ -1.24
ATG4A-203ENST00000372232 PSG2P11465 335 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 RPS18P62269 152 aaKnown RBP7.33□□□□□ -1.24
ATG4A-203ENST00000372232 Q0VFX4 171 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 TRIP6Q15654 476 aaKnown RBP7.33□□□□□ -1.24
ATG4A-203ENST00000372232 PLCXD3Q63HM9 321 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 FOXL2NBQ6ZUU3 175 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 DOK3Q7L591 496 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 OR52E5Q8NH55 327 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 NEU4Q8WWR8 484 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-203ENST00000372232 SPACA5Q96QH8 159 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 TMEM70Q9BUB7 260 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 PKIBQ9C010 78 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 UFC1Q9Y3C8 167 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 A0A1W2PPV4 95 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 hDV102S1A0JD36 115 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 TNFSF11O14788 317 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 OTX2P32243 289 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 GPR12P47775 334 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 FXYD4P59646 89 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 RNPS1Q15287 305 aaKnown RBP7.33□□□□□ -1.24
ATG4A-203ENST00000372232 ACSM6Q6P461 480 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 ADAMTSL5Q6ZMM2 481 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 GJC3Q8NFK1 279 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 NABP1Q96AH0 204 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 APOBEC3DQ96AK3 386 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-203ENST00000372232 SRXN1Q9BYN0 137 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 CLCF1Q9UBD9 225 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 LOXL2Q9Y4K0 774 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 ARL2-SNX15V9GYD0 113 aa7.33□□□□□ -1.24
ATG4A-203ENST00000372232 EML6Q6ZMW3 1958 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 ZNF318Q5VUA4 2279 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 TRBV20OR9-2A0A075B6H5 130 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms