RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 FHITP49789 147 aa13.41□□□□□ -0.26
PHGDH-202ENST00000369409 EBI3Q14213 229 aa13.41□□□□□ -0.26
PHGDH-202ENST00000369409 C2orf83Q53S99 150 aa13.41□□□□□ -0.26
PHGDH-202ENST00000369409 FAM120AOSQ5T036 256 aa13.41□□□□□ -0.26
PHGDH-202ENST00000369409 IGLC7A0M8Q6 106 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 REG1AP05451 166 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 APELAP0DMC3 54 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 BRS3P32247 399 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 CAMLGP49069 296 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 DLK1P80370 383 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 PSMG3Q9BT73 122 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-202ENST00000369409 NCBP2LA6PVI3 153 aaKnown RBP13.4□□□□□ -0.26
PHGDH-202ENST00000369409 FAM106CPP0CH98 169 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 RAB5CP51148 216 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 ZNF616Q08AN1 781 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 C5orf64Q2M2E5 130 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 FAM213BQ8TBF2 198 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 SRSF12Q8WXF0 261 aaKnown RBP13.4□□□□□ -0.26
PHGDH-202ENST00000369409 GGACTQ9BVM4 153 aa13.4□□□□□ -0.26
PHGDH-202ENST00000369409 UMAD1C9J7I0 102 aa13.39□□□□□ -0.27
PHGDH-202ENST00000369409 AVPP01185 164 aa13.39□□□□□ -0.27
PHGDH-202ENST00000369409 BLOC1S1P78537 153 aa13.39□□□□□ -0.27
PHGDH-202ENST00000369409 ARSJQ5FYB0 599 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-202ENST00000369409 AKR1C8PQ5T2L2 129 aa13.39□□□□□ -0.27
PHGDH-202ENST00000369409 MRPL41Q8IXM3 137 aaKnown RBP13.39□□□□□ -0.27
PHGDH-202ENST00000369409 HRH4Q9H3N8 390 aa13.39□□□□□ -0.27
PHGDH-202ENST00000369409 PARP11Q9NR21 331 aa13.39□□□□□ -0.27
PHGDH-202ENST00000369409 WDR83OSQ9Y284 106 aa13.39□□□□□ -0.27
PHGDH-202ENST00000369409 A0A0U1RQK1 487 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 MFSD2BA6NFX1 497 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 TEX22C9J3V5 150 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 TRIM77I1YAP6 450 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 CNIH1O95406 144 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 TGFAP01135 160 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 AREGP15514 252 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 ATP5IP56385 69 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-202ENST00000369409 PRSS57Q6UWY2 283 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 BTNL8Q6UX41 500 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 P2RX4Q99571 388 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 NPCDR1Q9BY65 106 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 IGHV4-31P0DP07 118 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 MDKP21741 143 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-202ENST00000369409 ELLP55199 621 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-202ENST00000369409 TMEM249Q2WGJ8 235 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 KLF17Q5JT82 389 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-202ENST00000369409 TREML4Q6UXN2 200 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 TIMM9Q9Y5J7 89 aa13.38□□□□□ -0.27
PHGDH-202ENST00000369409 CSMD1Q96PZ7 3565 aa13.37□□□□□ -0.27
PHGDH-202ENST00000369409 AKR1C1Q04828 323 aa13.37□□□□□ -0.27
PHGDH-202ENST00000369409 AANATQ16613 207 aa13.37□□□□□ -0.27
PHGDH-202ENST00000369409 C19orf35Q6ZS72 473 aa13.37□□□□□ -0.27
PHGDH-202ENST00000369409 SSMEM1Q8WWF3 244 aa13.37□□□□□ -0.27
PHGDH-202ENST00000369409 VSIRQ9H7M9 311 aa13.37□□□□□ -0.27
PHGDH-202ENST00000369409 ZANQ9Y493 2812 aa13.36□□□□□ -0.27
PHGDH-202ENST00000369409 SUB1P53999 127 aaKnown RBP eCLIP13.36□□□□□ -0.27
PHGDH-202ENST00000369409 ABHD5Q8WTS1 349 aa13.36□□□□□ -0.27
PHGDH-202ENST00000369409 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-202ENST00000369409 ABCA1O95477 2261 aa13.36□□□□□ -0.27
PHGDH-202ENST00000369409 CREBBPQ92793 2442 aa13.36□□□□□ -0.27
PHGDH-202ENST00000369409 SERF2P84101 59 aa13.36□□□□□ -0.27
PHGDH-202ENST00000369409 FXYD3Q14802 87 aa13.36□□□□□ -0.27
PHGDH-202ENST00000369409 HSD17B13Q7Z5P4 300 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-202ENST00000369409 ZNF709Q8N972 641 aa13.36□□□□□ -0.27
PHGDH-202ENST00000369409 ZNF114Q8NC26 417 aa13.36□□□□□ -0.27
PHGDH-202ENST00000369409 FAM103A1Q9BTL3 118 aaKnown RBP13.36□□□□□ -0.27
PHGDH-202ENST00000369409 NPVFQ9HCQ7 196 aa13.36□□□□□ -0.27
PHGDH-202ENST00000369409 PRRC2AP48634 2157 aaKnown RBP13.35□□□□□ -0.27
PHGDH-202ENST00000369409 ANKRD34BA5PLL1 514 aa13.35□□□□□ -0.27
PHGDH-202ENST00000369409 J3QLI3 93 aa13.35□□□□□ -0.27
PHGDH-202ENST00000369409 CD69Q07108 199 aa13.35□□□□□ -0.27
PHGDH-202ENST00000369409 ACSM6Q6P461 480 aa13.35□□□□□ -0.27
PHGDH-202ENST00000369409 CENPVQ7Z7K6 275 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-202ENST00000369409 Q8N9W7 124 aa13.35□□□□□ -0.27
PHGDH-202ENST00000369409 MGST2Q99735 147 aa13.35□□□□□ -0.27
PHGDH-202ENST00000369409 C1RLQ9NZP8 487 aa13.35□□□□□ -0.27
PHGDH-202ENST00000369409 FAM96BQ9Y3D0 163 aa13.35□□□□□ -0.27
PHGDH-202ENST00000369409 UNC79Q9P2D8 2635 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 A0A1B0GV50 99 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 FNDC10F2Z333 226 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 C17orf112F2Z3M2 114 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 I3L521 148 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 MPDU1O75352 247 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 OPRK1P41145 380 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 NDPQ00604 133 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 MLANAQ16655 118 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 SLC16A13Q7RTY0 426 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 WFDC11Q8NEX6 87 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 MARC2Q969Z3 335 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 RPRMQ9NS64 109 aa13.34□□□□□ -0.27
PHGDH-202ENST00000369409 LSM4Q9Y4Z0 139 aaKnown RBP13.34□□□□□ -0.27
PHGDH-202ENST00000369409 PDZD2O15018 2839 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 MFAP2P55001 183 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 CX3CL1P78423 397 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 TMEM41BQ5BJD5 291 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 FFAR4Q5NUL3 377 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 TEPPQ6URK8 271 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 DPPA3Q6W0C5 159 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 IL34Q6ZMJ4 242 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 LYPD6BQ8NI32 183 aa13.33□□□□□ -0.27
PHGDH-202ENST00000369409 RNASEH2CQ8TDP1 164 aaKnown RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms