RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ATP5G3P48201 142 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 ATP5IP56385 69 aaPredicted RBP9.48□□□□□ -0.89
USF1-201ENST00000368019 ZNF816Q0VGE8 651 aaPredicted RBP9.48□□□□□ -0.89
USF1-201ENST00000368019 TMEM183BQ1AE95 376 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 CR1LQ2VPA4 569 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 C9orf135Q5VTT2 229 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 WDR73Q6P4I2 378 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 MDP1Q86V88 176 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 CORO2AQ92828 525 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 Q96MF0 132 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 UHRF2Q96PU4 802 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 MIEN1Q9BRT3 115 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 GGTLC1Q9BX51 225 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 QTRT1Q9BXR0 403 aaKnown RBP9.48□□□□□ -0.89
USF1-201ENST00000368019 OPN3Q9H1Y3 402 aaPredicted RBP9.48□□□□□ -0.89
USF1-201ENST00000368019 NCOR1P1Q9H4R4 102 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 MXRA5Q9NR99 2828 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 MARCH11A6NNE9 402 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 C16orf97H3BN30 126 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 HMGB3O15347 200 aaKnown RBP9.47□□□□□ -0.89
USF1-201ENST00000368019 NDUFB4O95168 129 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 ADMP35318 185 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 MZT1Q08AG7 82 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 RTL8BQ17RB0 113 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 SPATA46Q5T0L3 261 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 ACP7Q6ZNF0 438 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 FAM90A1Q86YD7 464 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 PRR18Q8N4B5 295 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 CNEP1R1Q8N9A8 125 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 TBX15Q96SF7 602 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 MDFIQ99750 246 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 GNB1LQ9BYB4 327 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 RAB9BQ9NP90 201 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 JPT1Q9UK76 154 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
USF1-201ENST00000368019 CADP27708 2225 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 ABCA1O95477 2261 aa9.47□□□□□ -0.89
USF1-201ENST00000368019 DLEU1O43261 78 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 SPINT2O43291 252 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 THBDP07204 575 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 GCH1P30793 250 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 RPL29P47914 159 aaKnown RBP9.46□□□□□ -0.9
USF1-201ENST00000368019 LGALS4P56470 323 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 RHOBP62745 196 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 RELQ04864 619 aaPredicted RBP9.46□□□□□ -0.9
USF1-201ENST00000368019 OR10J3Q5JRS4 329 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 TPTE2P1Q5T6R2 138 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 CST9LP1Q5W188 147 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 OR4B1Q8NGF8 309 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 OR52L2PQ8NGH6 319 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 COQ2Q96H96 371 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 UBTD1Q9HAC8 227 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 NPVFQ9HCQ7 196 aa9.46□□□□□ -0.9
USF1-201ENST00000368019 YLPM1P49750 1951 aaKnown RBP9.45□□□□□ -0.9
USF1-201ENST00000368019 CR1P17927 2039 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 TRAV39A0A0B4J263 110 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 ZNF705FA8MVS1 300 aaPredicted RBP9.45□□□□□ -0.9
USF1-201ENST00000368019 C15orf65H3BRN8 121 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 PSPNO60542 156 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 ZNF705DP0CH99 300 aaPredicted RBP9.45□□□□□ -0.9
USF1-201ENST00000368019 ZNF705BP0CI00 300 aaPredicted RBP9.45□□□□□ -0.9
USF1-201ENST00000368019 ARL14EPLP0DKL9 152 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 CRISP2P16562 243 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 GCHFRP30047 84 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 DUTP33316 252 aaKnown RBP9.45□□□□□ -0.9
USF1-201ENST00000368019 ERVK-16P61578 105 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 RAB31Q13636 194 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 SMIM21Q3B7S5 101 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 TMEM256Q8N2U0 113 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.45□□□□□ -0.9
USF1-201ENST00000368019 C1orf162Q8NEQ5 155 aaPredicted RBP9.45□□□□□ -0.9
USF1-201ENST00000368019 OR5AU1Q8NGC0 362 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 PPP1R35Q8TAP8 253 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 SLC25A40Q8TBP6 338 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 PERPQ96FX8 193 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 SDSLQ96GA7 329 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 CCL19Q99731 98 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 MGST2Q99735 147 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 C19orf24Q9BVV8 132 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 OSTCQ9NRP0 149 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 PLSCR4Q9NRQ2 329 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 CBLN4Q9NTU7 201 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 TP53TG3Q9ULZ0 132 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 STAB1Q9NY15 2570 aa9.45□□□□□ -0.9
USF1-201ENST00000368019 ANK3Q12955 4377 aaKnown RBP9.44□□□□□ -0.9
USF1-201ENST00000368019 TRBV20OR9-2A0A075B6H5 130 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 LINC00473A8K010 186 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 SMAD7O15105 426 aaKnown RBP9.44□□□□□ -0.9
USF1-201ENST00000368019 RBMXL2O75526 392 aaKnown RBP9.44□□□□□ -0.9
USF1-201ENST00000368019 OR9G9P0C7N8 305 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 ZNF90Q03938 601 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 POU2AF1Q16633 256 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 RPEL1Q2QD12 228 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 RASL11AQ6T310 242 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 TOMM20LQ6UXN7 152 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 FAM214BQ7L5A3 538 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 C11orf53Q8IXP5 236 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 PNKDQ8N490 385 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms