RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 C5orf42Q9H799 3197 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 PRSS1P07477 247 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 ZNF585BQ52M93 769 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 SEPSECSQ9HD40 501 aaKnown RBP11.62□□□□□ -0.55
COL6A1-201ENST00000361866 SLC25A10Q9UBX3 287 aaPredicted RBP11.62□□□□□ -0.55
COL6A1-201ENST00000361866 JPT1Q9UK76 154 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 CHD3Q12873 2000 aaKnown RBP11.62□□□□□ -0.55
COL6A1-201ENST00000361866 A8MWP6 167 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 IGKV1D-33P01593 117 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 IGKV1-33P01594 117 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 C5orf17Q8NAS9 161 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 PFN1P07737 140 aaKnown RBP11.61□□□□□ -0.55
COL6A1-201ENST00000361866 SELLP14151 372 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 PPOXP50336 477 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 FOXF2Q12947 444 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 LHFPL4Q7Z7J7 247 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 ONECUT1Q9UBC0 465 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 PMCHL1Q16048 86 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 TNFRSF19Q9NS68 423 aa11.61□□□□□ -0.55
COL6A1-201ENST00000361866 PRRC2CQ9Y520 2896 aaKnown RBP11.61□□□□□ -0.55
COL6A1-201ENST00000361866 TNCP24821 2201 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 TREML4Q6UXN2 200 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 UNQ6494/PRO21346Q6UXR6 183 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
COL6A1-201ENST00000361866 MRPL37Q9BZE1 423 aaKnown RBP11.6□□□□□ -0.55
COL6A1-201ENST00000361866 PRDM13Q9H4Q3 707 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 RNF115Q9Y4L5 304 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 INSIG2Q9Y5U4 225 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 TICRRQ7Z2Z1 1910 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 RBFOX2O43251 390 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL6A1-201ENST00000361866 HYPMO75409 117 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 IGHV1-2P23083 117 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 EFNB3Q15768 340 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 ACSF3Q4G176 576 aaPredicted RBP11.6□□□□□ -0.55
COL6A1-201ENST00000361866 DTX1Q86Y01 620 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 RAB37Q96AX2 223 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 TRAV3A0A0B4J244 114 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 IFNL4K9M1U5 179 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 Q5PR19 223 aa11.6□□□□□ -0.55
COL6A1-201ENST00000361866 LINC00473A8K010 186 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 SP9P0CG40 484 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 NMUP48645 174 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 PRB3Q04118 309 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-201ENST00000361866 FAM216BQ8N7L0 139 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 TMEM105Q8N8V8 129 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 KCNS1Q96KK3 526 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 RASL11BQ9BPW5 248 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 NDFIP1Q9BT67 221 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 SEMA5BQ9P283 1151 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 LAMTOR2Q9Y2Q5 125 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 ZFHX2Q9C0A1 2572 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-201ENST00000361866 ZNF785A8K8V0 405 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 MYOD1P15172 320 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 LCN12Q6JVE5 192 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 COL4A4P53420 1690 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-201ENST00000361866 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.59□□□□□ -0.55
COL6A1-201ENST00000361866 MUC21A0A0G2JKD1 596 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 MUC21A0A140T8X8 626 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 IGKV1-39P01597 117 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 IGKV1D-39P04432 117 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 NRN1LQ496H8 165 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 MUC21Q5SSG8 566 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 ASCL4Q6XD76 172 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 C2orf88Q9BSF0 95 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 ZNF71Q9NQZ8 489 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-201ENST00000361866 YTHDF2Q9Y5A9 579 aaKnown RBP11.59□□□□□ -0.55
COL6A1-201ENST00000361866 MED13Q9UHV7 2174 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 TRGV8A0A0C4DH27 118 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 CORTO00230 105 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 DLEU1O43261 78 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 NUDT3O95989 172 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 Q0VFX4 171 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 OR9G1Q8NH87 305 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 GGTLC1Q9BX51 225 aa11.59□□□□□ -0.55
COL6A1-201ENST00000361866 CUL9Q8IWT3 2517 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 BPTFQ12830 3046 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 FOXH1O75593 365 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 PYYP10082 97 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 SNHG12Q9BXW3 62 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 PPP1R14DQ9NXH3 145 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 DUTP33316 252 aaKnown RBP11.58□□□□□ -0.56
COL6A1-201ENST00000361866 COMPP49747 757 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-201ENST00000361866 C1orf194Q5T5A4 169 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 WDR82Q6UXN9 313 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 Q6ZT83 130 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 ZNF430Q9H8G1 570 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-201ENST00000361866 ARFGEF3Q5TH69 2177 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 ORM1P02763 201 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 SLC25A34Q6PIV7 304 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 ZCCHC24Q8N2G6 241 aaKnown RBP11.58□□□□□ -0.56
COL6A1-201ENST00000361866 STXBP6Q8NFX7 210 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 PPIAL4AQ9Y536 164 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 DENND4AQ7Z401 1863 aa11.58□□□□□ -0.56
COL6A1-201ENST00000361866 J3KRW8 73 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 GNG7O60262 68 aa11.57□□□□□ -0.56
COL6A1-201ENST00000361866 B3GALT5-AS1P59052 145 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms