RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 HOXA1P49639 335 aaPredicted RBP13.92□□□□□ -0.18
CLK2-202ENST00000361168 H2BFSP57053 126 aa13.92□□□□□ -0.18
CLK2-202ENST00000361168 FOXE3Q13461 319 aa13.92□□□□□ -0.18
CLK2-202ENST00000361168 THOC7Q6I9Y2 204 aaKnown RBP13.92□□□□□ -0.18
CLK2-202ENST00000361168 OR5M8Q8NGP6 311 aa13.92□□□□□ -0.18
CLK2-202ENST00000361168 P2RX4Q99571 388 aa13.92□□□□□ -0.18
CLK2-202ENST00000361168 TCRBV4S1A1TA0A5B7 111 aa13.91□□□□□ -0.18
CLK2-202ENST00000361168 C5orf51A6NDU8 294 aa13.91□□□□□ -0.18
CLK2-202ENST00000361168 OR2J3O76001 311 aa13.91□□□□□ -0.18
CLK2-202ENST00000361168 IGHV3-11P01762 117 aa13.91□□□□□ -0.18
CLK2-202ENST00000361168 TRGV3P03979 118 aa13.91□□□□□ -0.18
CLK2-202ENST00000361168 CXCL3P19876 107 aa13.91□□□□□ -0.18
CLK2-202ENST00000361168 TPPP2P59282 170 aa13.91□□□□□ -0.18
CLK2-202ENST00000361168 PDLIM3Q53GG5 364 aaPredicted RBP13.91□□□□□ -0.18
CLK2-202ENST00000361168 RNF152Q8N8N0 203 aa13.91□□□□□ -0.18
CLK2-202ENST00000361168 OR52E5Q8NH55 327 aa13.91□□□□□ -0.18
CLK2-202ENST00000361168 IGHV3-21A0A0B4J1V1 117 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 CEBPZOSA8MTT3 80 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 ELANEP08246 267 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 SLC25A6P12236 298 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 DEFA4P12838 97 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 POLR2GP62487 172 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLK2-202ENST00000361168 NSUN5P1Q3KNT7 163 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 TMEM65Q6PI78 240 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 OR2C3Q8N628 320 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 ZBTB8BQ8NAP8 495 aaPredicted RBP13.9□□□□□ -0.18
CLK2-202ENST00000361168 TMEM170AQ8WVE7 144 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 TMEM68Q96MH6 324 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 GNB4Q9HAV0 340 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 CMYA5Q8N3K9 4069 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 SCGB1D2O95969 90 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 IAPPP10997 89 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 MYOZ3Q8TDC0 251 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 DUX3Q96PT4 197 aa13.9□□□□□ -0.18
CLK2-202ENST00000361168 IGLV11-55A0A075B6I3 123 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 TRBV9A0A0B4J1U6 114 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 NDUFB8O95169 186 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 TMEM50AO95807 157 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 IGHV3-48P01763 117 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 RHOGP84095 191 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 ID3Q02535 119 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 DEFB136Q30KP8 78 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 ZNF491Q8N8L2 437 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 DTD1Q8TEA8 209 aa13.89□□□□□ -0.19
CLK2-202ENST00000361168 HEYLQ9NQ87 328 aaPredicted RBP13.89□□□□□ -0.19
CLK2-202ENST00000361168 F11RQ9Y624 299 aaKnown RBP13.89□□□□□ -0.19
CLK2-202ENST00000361168 PIGBOS1A0A0B4J2F0 54 aa13.88□□□□□ -0.19
CLK2-202ENST00000361168 IGHV3-23P01764 117 aa13.88□□□□□ -0.19
CLK2-202ENST00000361168 MBPP02686 304 aaPredicted RBP13.88□□□□□ -0.19
CLK2-202ENST00000361168 OR11H7Q8NGC8 314 aa13.88□□□□□ -0.19
CLK2-202ENST00000361168 SRSF8Q9BRL6 282 aaKnown RBP13.88□□□□□ -0.19
CLK2-202ENST00000361168 WRBO00258 174 aa13.88□□□□□ -0.19
CLK2-202ENST00000361168 RNASE2P10153 161 aaKnown RBP13.88□□□□□ -0.19
CLK2-202ENST00000361168 NKX2-1P43699 371 aaPredicted RBP13.88□□□□□ -0.19
CLK2-202ENST00000361168 IL15RAQ13261 267 aa13.88□□□□□ -0.19
CLK2-202ENST00000361168 FCN2Q15485 313 aa13.88□□□□□ -0.19
CLK2-202ENST00000361168 C8orf86Q6ZUL3 223 aa13.88□□□□□ -0.19
CLK2-202ENST00000361168 MGAT4CQ9UBM8 478 aa13.88□□□□□ -0.19
CLK2-202ENST00000361168 H3BP45 60 aa13.87□□□□□ -0.19
CLK2-202ENST00000361168 RPL23AP62750 156 aaKnown RBP13.87□□□□□ -0.19
CLK2-202ENST00000361168 C15orf32Q32M92 178 aa13.87□□□□□ -0.19
CLK2-202ENST00000361168 SLC25A24Q6NUK1 477 aa13.87□□□□□ -0.19
CLK2-202ENST00000361168 GSG1LQ6UXU4 331 aa13.87□□□□□ -0.19
CLK2-202ENST00000361168 COMMD1Q8N668 190 aa13.87□□□□□ -0.19
CLK2-202ENST00000361168 C2orf50Q96LR7 162 aa13.87□□□□□ -0.19
CLK2-202ENST00000361168 FBXL7Q9UJT9 491 aa13.87□□□□□ -0.19
CLK2-202ENST00000361168 RCL1Q9Y2P8 373 aaKnown RBP13.87□□□□□ -0.19
CLK2-202ENST00000361168 TSSC4Q9Y5U2 329 aaPredicted RBP13.87□□□□□ -0.19
CLK2-202ENST00000361168 MFSD2BA6NFX1 497 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 SYNGR2O43760 224 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 SSSCA1O60232 199 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 TRBV12-3P01733 135 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 ERHP84090 104 aaKnown RBP13.86□□□□□ -0.19
CLK2-202ENST00000361168 MLANAQ16655 118 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 BSXQ3C1V8 233 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 KLHL30-AS1Q8NEE0 82 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 SPATA3Q8NHX4 192 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 SLA2Q9H6Q3 261 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 INS-IGF2F8WCM5 200 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 SNCAP37840 140 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 RAB32Q13637 225 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 SHISA2Q6UWI4 295 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 HSD17B13Q7Z5P4 300 aaPredicted RBP13.86□□□□□ -0.19
CLK2-202ENST00000361168 ENY2Q9NPA8 101 aa13.86□□□□□ -0.19
CLK2-202ENST00000361168 H3BUA1 57 aa13.85□□□□□ -0.19
CLK2-202ENST00000361168 CDX1P47902 265 aaPredicted RBP13.85□□□□□ -0.19
CLK2-202ENST00000361168 PAX9P55771 341 aa13.85□□□□□ -0.19
CLK2-202ENST00000361168 LRRC37A5PQ49AS3 106 aa13.85□□□□□ -0.19
CLK2-202ENST00000361168 OR1P1Q8NH06 330 aa13.85□□□□□ -0.19
CLK2-202ENST00000361168 PINX1Q96BK5 328 aaKnown RBP13.85□□□□□ -0.19
CLK2-202ENST00000361168 MISP3Q96FF7 219 aa13.85□□□□□ -0.19
CLK2-202ENST00000361168 UBE2E2Q96LR5 201 aa13.85□□□□□ -0.19
CLK2-202ENST00000361168 FAM90A26D6RGX4 464 aa13.84□□□□□ -0.19
CLK2-202ENST00000361168 ZNF114Q8NC26 417 aa13.84□□□□□ -0.19
CLK2-202ENST00000361168 NECAP1Q8NC96 275 aa13.84□□□□□ -0.19
CLK2-202ENST00000361168 SLC24A4Q8NFF2 622 aa13.84□□□□□ -0.19
CLK2-202ENST00000361168 MED28Q9H204 178 aa13.84□□□□□ -0.19
CLK2-202ENST00000361168 LSM5Q9Y4Y9 91 aaKnown RBP13.84□□□□□ -0.19
CLK2-202ENST00000361168 MGAM2Q2M2H8 2515 aa13.84□□□□□ -0.19
CLK2-202ENST00000361168 NOTCH3Q9UM47 2321 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms