RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 FNDC10F2Z333 226 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 MPDU1O75352 247 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 CNIH1O95406 144 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 IGHV4-38-2P0DP08 117 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 CAMLGP49069 296 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 Q6ZRG5 221 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 SRSF12Q8WXF0 261 aaKnown RBP14.9□□□□□ -0.02
PTN-201ENST00000348225 CITED4Q96RK1 184 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 RSG1Q9BU20 258 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 APCP25054 2843 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 A0A1B0GW64 132 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 IGLC7A0M8Q6 106 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 TGFAP01135 160 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 SERF2P84101 59 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 TMEM249Q2WGJ8 235 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 BRD3OSQ6XYD6 125 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 KRTAP1-3Q8IUG1 177 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 ZNF709Q8N972 641 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 WDR83OSQ9Y284 106 aa14.89□□□□□ -0.03
PTN-201ENST00000348225 NBPF19A0A087WUL8 3843 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 C17orf112F2Z3M2 114 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 FCN1O00602 326 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 IGHV4-31P0DP07 118 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 FAM120AOSQ5T036 256 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 PXDC1Q5TGL8 231 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 DPPA3Q6W0C5 159 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 ZNF114Q8NC26 417 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 MAPK1IP1LQ8NDC0 245 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 RNASEH2CQ8TDP1 164 aaKnown RBP14.88□□□□□ -0.03
PTN-201ENST00000348225 MEGF9Q9H1U4 602 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 NPVFQ9HCQ7 196 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 FAM96BQ9Y3D0 163 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 FBXO7Q9Y3I1 522 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.88□□□□□ -0.03
PTN-201ENST00000348225 MDKP21741 143 aaPredicted RBP14.88□□□□□ -0.03
PTN-201ENST00000348225 FBLN7Q53RD9 439 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 BTNL8Q6UX41 500 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 CENPVQ7Z7K6 275 aaPredicted RBP14.88□□□□□ -0.03
PTN-201ENST00000348225 FAM213BQ8TBF2 198 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 P2RX4Q99571 388 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 NPCDR1Q9BY65 106 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 RFNGQ9Y644 331 aa14.88□□□□□ -0.03
PTN-201ENST00000348225 A0A0U1RQK1 487 aa14.87□□□□□ -0.03
PTN-201ENST00000348225 NUDT19A8MXV4 375 aa14.87□□□□□ -0.03
PTN-201ENST00000348225 TEX22C9J3V5 150 aa14.87□□□□□ -0.03
PTN-201ENST00000348225 SSBP2P81877 361 aaPredicted RBP14.87□□□□□ -0.03
PTN-201ENST00000348225 ZNF616Q08AN1 781 aa14.87□□□□□ -0.03
PTN-201ENST00000348225 SOX15O60248 233 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 FBP1P09467 338 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 GPX4P36969 197 aaPredicted RBP14.86□□□□□ -0.03
PTN-201ENST00000348225 BPIFB3P59826 476 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 AKR1C1Q04828 323 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 FXYD3Q14802 87 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 KLF17Q5JT82 389 aaPredicted RBP14.86□□□□□ -0.03
PTN-201ENST00000348225 TREML4Q6UXN2 200 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 ABHD5Q8WTS1 349 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 SSMEM1Q8WWF3 244 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 HRH4Q9H3N8 390 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 CR1P17927 2039 aa14.86□□□□□ -0.03
PTN-201ENST00000348225 MFSD2BA6NFX1 497 aa14.85□□□□□ -0.03
PTN-201ENST00000348225 REG1AP05451 166 aa14.85□□□□□ -0.03
PTN-201ENST00000348225 CD69Q07108 199 aa14.85□□□□□ -0.03
PTN-201ENST00000348225 ARSJQ5FYB0 599 aaPredicted RBP14.85□□□□□ -0.03
PTN-201ENST00000348225 ZNF562Q6V9R5 426 aa14.85□□□□□ -0.03
PTN-201ENST00000348225 IL34Q6ZMJ4 242 aa14.85□□□□□ -0.03
PTN-201ENST00000348225 CACNG8Q8WXS5 425 aa14.85□□□□□ -0.03
PTN-201ENST00000348225 RASL11BQ9BPW5 248 aa14.85□□□□□ -0.03
PTN-201ENST00000348225 KCNIP2Q9NS61 270 aa14.85□□□□□ -0.03
PTN-201ENST00000348225 TEX46H3BTG2 121 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 CORTO00230 105 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 TSPAN9O75954 239 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 AVPP01185 164 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 MBP02144 154 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 AREGP15514 252 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 FHITP49789 147 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 RAB31Q13636 194 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 TEPPQ6URK8 271 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 EIF4E3Q8N5X7 224 aaKnown RBP14.84□□□□□ -0.03
PTN-201ENST00000348225 Q8N9W7 124 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 OR1P1Q8NH06 330 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 MARC2Q969Z3 335 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 SLC35E1Q96K37 410 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 AANATQ16613 207 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 TMEM41BQ5BJD5 291 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 SLC16A13Q7RTY0 426 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 LYPD6BQ8NI32 183 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 ARPC1AQ92747 370 aa14.84□□□□□ -0.03
PTN-201ENST00000348225 F11RQ9Y624 299 aaKnown RBP14.84□□□□□ -0.03
PTN-201ENST00000348225 RAB19A4D1S5 217 aa14.83□□□□□ -0.04
PTN-201ENST00000348225 PLXNB1O43157 2135 aa14.83□□□□□ -0.04
PTN-201ENST00000348225 TSPAN15O95858 294 aa14.83□□□□□ -0.04
PTN-201ENST00000348225 HLA-DRB1P01911 266 aa14.83□□□□□ -0.04
PTN-201ENST00000348225 OPRK1P41145 380 aa14.83□□□□□ -0.04
PTN-201ENST00000348225 ELLP55199 621 aaPredicted RBP14.83□□□□□ -0.04
PTN-201ENST00000348225 CX3CL1P78423 397 aa14.83□□□□□ -0.04
PTN-201ENST00000348225 CYB5R2Q6BCY4 276 aa14.83□□□□□ -0.04
PTN-201ENST00000348225 PVRIGQ6DKI7 326 aa14.83□□□□□ -0.04
PTN-201ENST00000348225 ETFRF1Q6IPR1 90 aa14.83□□□□□ -0.04
PTN-201ENST00000348225 LSM4Q9Y4Z0 139 aaKnown RBP14.83□□□□□ -0.04
PTN-201ENST00000348225 APELAP0DMC3 54 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms