RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 IQCF2Q8IXL9 164 aa14.78□□□□□ -0.04
CCDC43-201ENST00000315286 C17orf50Q8WW18 174 aa14.78□□□□□ -0.04
CCDC43-201ENST00000315286 A0A1W2PPV4 95 aa14.77□□□□□ -0.04
CCDC43-201ENST00000315286 CD81P60033 236 aa14.77□□□□□ -0.04
CCDC43-201ENST00000315286 B2MP61769 119 aa14.77□□□□□ -0.04
CCDC43-201ENST00000315286 SLC35E3Q7Z769 313 aa14.77□□□□□ -0.04
CCDC43-201ENST00000315286 TEX45Q8NA69 505 aa14.77□□□□□ -0.04
CCDC43-201ENST00000315286 WNK2Q9Y3S1 2297 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 M0R1W7 72 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 CRYGBP07316 175 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 PSMB3P49720 205 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 EFNA4P52798 201 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 MEF2BQ02080 365 aaPredicted RBP14.77□□□□□ -0.05
CCDC43-201ENST00000315286 RAB31Q13636 194 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 GAMTQ14353 236 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 TMEM144Q7Z5S9 345 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 STPG3Q8N7X2 389 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 OR11H6Q8NGC7 330 aa14.77□□□□□ -0.05
CCDC43-201ENST00000315286 IGKV1OR2-108A0A075B7D4 117 aa14.76□□□□□ -0.05
CCDC43-201ENST00000315286 COLCA2A8K830 154 aa14.76□□□□□ -0.05
CCDC43-201ENST00000315286 RPL29P47914 159 aaKnown RBP14.76□□□□□ -0.05
CCDC43-201ENST00000315286 CD69Q07108 199 aa14.76□□□□□ -0.05
CCDC43-201ENST00000315286 PSG5Q15238 335 aa14.76□□□□□ -0.05
CCDC43-201ENST00000315286 NIPSNAP3BQ9BS92 247 aa14.76□□□□□ -0.05
CCDC43-201ENST00000315286 KCNIP2Q9NS61 270 aa14.76□□□□□ -0.05
CCDC43-201ENST00000315286 A0A1W2PPI3 338 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 ZFP36P26651 326 aaKnown RBP14.75□□□□□ -0.05
CCDC43-201ENST00000315286 KLRD1Q13241 179 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 PRSS8Q16651 343 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 TVP23CQ96ET8 276 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 MANBALQ9NQG1 85 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 USP24Q9UPU5 2620 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 FLNCQ14315 2725 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 PRTN3P24158 256 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 HTR1DP28221 377 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 PRR20EP86478 221 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 PRR20CP86479 221 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 PRR20DP86480 221 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 PRR20BP86481 221 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 PRR20AP86496 221 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 TPTE2P1Q5T6R2 138 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 HCP5Q6MZN7 132 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 MMD2Q8IY49 270 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 ABHD5Q8WTS1 349 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 ISOC2Q96AB3 205 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 SIGLEC9Q9Y336 463 aa14.75□□□□□ -0.05
CCDC43-201ENST00000315286 COL12A1Q99715 3063 aa14.74□□□□□ -0.05
CCDC43-201ENST00000315286 PAGE4O60829 102 aa14.74□□□□□ -0.05
CCDC43-201ENST00000315286 LINC00869P0C866 280 aa14.74□□□□□ -0.05
CCDC43-201ENST00000315286 TUBA4BQ9H853 241 aa14.74□□□□□ -0.05
CCDC43-201ENST00000315286 DPM3Q9P2X0 92 aa14.74□□□□□ -0.05
CCDC43-201ENST00000315286 SLC45A2Q9UMX9 530 aa14.74□□□□□ -0.05
CCDC43-201ENST00000315286 TAGLN2P37802 199 aaKnown RBP14.73□□□□□ -0.05
CCDC43-201ENST00000315286 TMEM249Q2WGJ8 235 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 OR2T6Q8NHC8 308 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 CACNG8Q8WXS5 425 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 METTL1Q9UBP6 276 aaKnown RBP14.73□□□□□ -0.05
CCDC43-201ENST00000315286 HILPDAQ9Y5L2 63 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 TIMM23O14925 209 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 REG1AP05451 166 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 GPX4P36969 197 aaPredicted RBP14.73□□□□□ -0.05
CCDC43-201ENST00000315286 TNXAQ16473 311 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 SLC16A13Q7RTY0 426 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 LHFPL4Q7Z7J7 247 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 C15orf54Q8N8G6 183 aa14.73□□□□□ -0.05
CCDC43-201ENST00000315286 SEPSECSQ9HD40 501 aaKnown RBP14.73□□□□□ -0.05
CCDC43-201ENST00000315286 IGLC7A0M8Q6 106 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 ACTL6BO94805 426 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 IGHV2-5P01817 119 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 STAG3L2P0CL84 134 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 STAG3L3P0CL85 134 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 ARL14EPLP0DKL9 152 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 PAX6P26367 422 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 OR10J1P30954 320 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 SUB1P53999 127 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCDC43-201ENST00000315286 SPATA31B1PQ5VZV4 182 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 PPP1R27Q86WC6 154 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 OR4F5Q8NH21 305 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 IGFBPL1Q8WX77 278 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 OR4F4Q96R69 305 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 FBXL15Q9H469 300 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 A0A1W2PRD5 423 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 A0A1W2PRF3 423 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 A0A1W2PRM7 423 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 ODF3BA8MYP8 253 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 OVOL3O00110 214 aa14.72□□□□□ -0.05
CCDC43-201ENST00000315286 GATA2P23769 480 aaPredicted RBP14.72□□□□□ -0.05
CCDC43-201ENST00000315286 RPL27AP46776 148 aaKnown RBP14.72□□□□□ -0.05
CCDC43-201ENST00000315286 RNASEH2CQ8TDP1 164 aaKnown RBP14.72□□□□□ -0.05
CCDC43-201ENST00000315286 FNDC4Q9H6D8 234 aaPredicted RBP14.72□□□□□ -0.05
CCDC43-201ENST00000315286 ZNF727A8MUV8 499 aa14.71□□□□□ -0.05
CCDC43-201ENST00000315286 COMPP49747 757 aaPredicted RBP14.71□□□□□ -0.05
CCDC43-201ENST00000315286 C1orf122Q6ZSJ8 110 aa14.71□□□□□ -0.05
CCDC43-201ENST00000315286 ACY3Q96HD9 319 aa14.71□□□□□ -0.05
CCDC43-201ENST00000315286 USP9XQ93008 2570 aaPredicted RBP14.71□□□□□ -0.06
CCDC43-201ENST00000315286 VENTXO95231 258 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 CRYBA1P05813 215 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 APELAP0DMC3 54 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 RHOBP62745 196 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 GNB1P62873 340 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms