RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 WDR73Q6P4I2 378 aa11.13□□□□□ -0.63
SCAF4-201ENST00000286835 TCTEX1D1Q8N7M0 179 aa11.13□□□□□ -0.63
SCAF4-201ENST00000286835 ST6GALNAC6Q969X2 333 aa11.13□□□□□ -0.63
SCAF4-201ENST00000286835 NABP2Q9BQ15 211 aa11.13□□□□□ -0.63
SCAF4-201ENST00000286835 RNF24Q9Y225 148 aa11.13□□□□□ -0.63
SCAF4-201ENST00000286835 OPRK1P41145 380 aa11.12□□□□□ -0.63
SCAF4-201ENST00000286835 FOXL1Q12952 345 aa11.12□□□□□ -0.63
SCAF4-201ENST00000286835 OR51B2Q9Y5P1 312 aa11.12□□□□□ -0.63
SCAF4-201ENST00000286835 ATG2AQ2TAZ0 1938 aa11.12□□□□□ -0.63
SCAF4-201ENST00000286835 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
SCAF4-201ENST00000286835 ZNF146Q15072 292 aa11.12□□□□□ -0.63
SCAF4-201ENST00000286835 FAM214BQ7L5A3 538 aa11.12□□□□□ -0.63
SCAF4-201ENST00000286835 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
SCAF4-201ENST00000286835 TMEM210A6NLX4 147 aa11.12□□□□□ -0.63
SCAF4-201ENST00000286835 GPR6P46095 362 aaPredicted RBP11.12□□□□□ -0.63
SCAF4-201ENST00000286835 ZNF355PQ9NSJ1 428 aa11.12□□□□□ -0.63
SCAF4-201ENST00000286835 IGHV3-21A0A0B4J1V1 117 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 H3BTX0 84 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 CSN3P07498 182 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 PRB4P10163 310 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-201ENST00000286835 ORM2P19652 201 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 ZNF137PP52743 207 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 LCN12Q6JVE5 192 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 MOB3BQ86TA1 216 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 OR4B1Q8NGF8 309 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 OPN3Q9H1Y3 402 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-201ENST00000286835 TMEM167BQ9NRX6 74 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 TRGV10A0A0A0MS01 117 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 C10orf142B7Z368 130 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 STAG3L2P0CL84 134 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 STAG3L3P0CL85 134 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 IGHV1-2P23083 117 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 DUTP33316 252 aaKnown RBP11.11□□□□□ -0.63
SCAF4-201ENST00000286835 GABRA6Q16445 453 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 ACSF3Q4G176 576 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-201ENST00000286835 OR4C5Q8NGB2 326 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 MBNL3Q9NUK0 354 aaKnown RBP11.11□□□□□ -0.63
SCAF4-201ENST00000286835 TRBV20OR9-2A0A075B6H5 130 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 DPRXA6NFQ7 191 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 TNFSF13O75888 250 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 FAM87AP0C7U9 286 aa11.11□□□□□ -0.63
SCAF4-201ENST00000286835 GMPPAQ96IJ6 420 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-201ENST00000286835 DLL1O00548 723 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 RTL8BQ17RB0 113 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 KRTAP27-1Q3LI81 207 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 COA6Q5JTJ3 125 aaKnown RBP11.1□□□□□ -0.63
SCAF4-201ENST00000286835 WDR82Q6UXN9 313 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 ZNF835Q9Y2P0 537 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 FRYQ5TBA9 3013 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 CBY3A6NI87 242 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 APOA2P02652 100 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 CD99P14209 185 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 TCTAP57738 103 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 LHFPL4Q7Z7J7 247 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 SSBP4Q9BWG4 385 aaPredicted RBP11.1□□□□□ -0.63
SCAF4-201ENST00000286835 UQCR10Q9UDW1 63 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 FOXA3P55318 350 aaPredicted RBP11.1□□□□□ -0.63
SCAF4-201ENST00000286835 RBM14Q96PK6 669 aaKnown RBP11.1□□□□□ -0.63
SCAF4-201ENST00000286835 NEU1Q99519 415 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 LPAR2Q9HBW0 351 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
SCAF4-201ENST00000286835 TYMSP04818 313 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 MLANAQ16655 118 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 VWA1Q6PCB0 445 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 OR2V2Q96R30 315 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 NPIPB11E5RHQ5 1161 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 MLNRO43193 412 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 HSPE1P61604 102 aaKnown RBP11.09□□□□□ -0.63
SCAF4-201ENST00000286835 ERHP84090 104 aaKnown RBP11.09□□□□□ -0.63
SCAF4-201ENST00000286835 PRR7Q8TB68 274 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 RNF2Q99496 336 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 TXNDC17Q9BRA2 123 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 ANKRD11Q6UB99 2663 aaPredicted RBP11.09□□□□□ -0.63
SCAF4-201ENST00000286835 SLC25A5P05141 298 aaKnown RBP11.09□□□□□ -0.63
SCAF4-201ENST00000286835 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
SCAF4-201ENST00000286835 ABHD17AQ96GS6 310 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 CALYQ9NYX4 217 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 FBXL7Q9UJT9 491 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 OR4A47Q6IF82 309 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 VPS25Q9BRG1 176 aa11.09□□□□□ -0.63
SCAF4-201ENST00000286835 INO80CQ6PI98 192 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-201ENST00000286835 C5orf30Q96GV9 206 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 LINC00479Q96M42 142 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 Q6ZR03 302 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 PARD6GQ9BYG4 376 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-201ENST00000286835 MGST3O14880 152 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 CECR9P0C854 216 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 MORN2Q502X0 79 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 Q6ZVH6 145 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 BHLHA15Q7RTS1 189 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-201ENST00000286835 AP1S3Q96PC3 154 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 CCL13Q99616 98 aa11.08□□□□□ -0.64
SCAF4-201ENST00000286835 CHEK1O14757 476 aa11.07□□□□□ -0.64
SCAF4-201ENST00000286835 RAB9BQ9NP90 201 aa11.07□□□□□ -0.64
SCAF4-201ENST00000286835 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
SCAF4-201ENST00000286835 TMPRSS2O15393 492 aa11.07□□□□□ -0.64
SCAF4-201ENST00000286835 LINC00869P0C866 280 aa11.07□□□□□ -0.64
SCAF4-201ENST00000286835 OR9G1Q8NH87 305 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms