RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SRSF12Q8WXF0 261 aaKnown RBP11.33□□□□□ -0.6
SDF2-201ENST00000247020 CACNG8Q8WXS5 425 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 MARC2Q969Z3 335 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 RSG1Q9BU20 258 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 NPCDR1Q9BY65 106 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 KCNIP2Q9NS61 270 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 FBXO7Q9Y3I1 522 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 SPG11Q96JI7 2443 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 TENM4Q6N022 2769 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 A0A1B0GW64 132 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 IGLC7A0M8Q6 106 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 CORTO00230 105 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 AANATQ16613 207 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 C10orf55Q5SWW7 151 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 TREML4Q6UXN2 200 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 LFNGQ8NES3 379 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 C17orf50Q8WW18 174 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 CR1P17927 2039 aa11.32□□□□□ -0.6
SDF2-201ENST00000247020 TACC2O95359 2948 aa11.32□□□□□ -0.6
SDF2-201ENST00000247020 BTBD17A6NE02 478 aa11.32□□□□□ -0.6
SDF2-201ENST00000247020 TEX22C9J3V5 150 aa11.32□□□□□ -0.6
SDF2-201ENST00000247020 OR13C7P0DN81 318 aa11.32□□□□□ -0.6
SDF2-201ENST00000247020 SSBP2P81877 361 aaPredicted RBP11.32□□□□□ -0.6
SDF2-201ENST00000247020 CD69Q07108 199 aa11.32□□□□□ -0.6
SDF2-201ENST00000247020 LSM4Q9Y4Z0 139 aaKnown RBP11.32□□□□□ -0.6
SDF2-201ENST00000247020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.32□□□□□ -0.69e-12■■■■□ 24.7
SDF2-201ENST00000247020 DOPEY2Q9Y3R5 2298 aa11.32□□□□□ -0.6
SDF2-201ENST00000247020 TEX46H3BTG2 121 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 ZNF616Q08AN1 781 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 RAB31Q13636 194 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 TMEM41BQ5BJD5 291 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 ARSJQ5FYB0 599 aaPredicted RBP11.31□□□□□ -0.6
SDF2-201ENST00000247020 TEPPQ6URK8 271 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 ZNF562Q6V9R5 426 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 OR1L6Q8NGR2 347 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 OR1P1Q8NH06 330 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 FAM213BQ8TBF2 198 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 P2RX4Q99571 388 aa11.31□□□□□ -0.6
SDF2-201ENST00000247020 SMCO3A2RU48 225 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 ANKRD34BA5PLL1 514 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 RNF223E7ERA6 249 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 TSPAN15O95858 294 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 HBE1P02100 147 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 OPRK1P41145 380 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 HNF4GQ14541 408 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 ETFRF1Q6IPR1 90 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 HRH4Q9H3N8 390 aa11.3□□□□□ -0.6
SDF2-201ENST00000247020 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 FCN1O00602 326 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 CNIH1O95406 144 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 FBP1P09467 338 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 H2AFB1P0C5Y9 115 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 RAB2AP61019 212 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 GNB1P62873 340 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 AKR1C1Q04828 323 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 KRTAP1-3Q8IUG1 177 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 SLC35E1Q96K37 410 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 F11RQ9Y624 299 aaKnown RBP11.29□□□□□ -0.6
SDF2-201ENST00000247020 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 MED13LQ71F56 2210 aa11.29□□□□□ -0.6
SDF2-201ENST00000247020 NCBP2LA6PVI3 153 aaKnown RBP11.28□□□□□ -0.6
SDF2-201ENST00000247020 KRBOX1C9JBD0 128 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 I3L521 148 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 IGHV4-31P0DP07 118 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 IGHV4-38-2P0DP08 117 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 CD24P25063 80 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 PAX6P26367 422 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 FHITP49789 147 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 FXYD3Q14802 87 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 TMEM249Q2WGJ8 235 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 RUSC1-AS1Q66K80 236 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 SLC16A13Q7RTY0 426 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 Q8N9W7 124 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 Q96MF0 132 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 RPRMQ9NS64 109 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 CELSR2Q9HCU4 2923 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 TGFAP01135 160 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 M6PRP20645 277 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 RPL29P47914 159 aaKnown RBP11.28□□□□□ -0.6
SDF2-201ENST00000247020 ACOT6Q3I5F7 207 aaPredicted RBP11.28□□□□□ -0.6
SDF2-201ENST00000247020 FFAR4Q5NUL3 377 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 SSMEM1Q8WWF3 244 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 MBD3L1Q8WWY6 194 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 FAM210AQ96ND0 272 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 MGST2Q99735 147 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 RASL11BQ9BPW5 248 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 GGTLC1Q9BX51 225 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 FAM96BQ9Y3D0 163 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 PTPN13Q12923 2485 aa11.28□□□□□ -0.6
SDF2-201ENST00000247020 PRRC2AP48634 2157 aaKnown RBP11.28□□□□□ -0.6
SDF2-201ENST00000247020 PLXNB1O43157 2135 aa11.27□□□□□ -0.6
SDF2-201ENST00000247020 A0A0U1RQK1 487 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 NPIPB5A8MRT5 1133 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 AGPAT2O15120 278 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 CRYGCP07315 174 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 AREGP15514 252 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms