RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 HNF4GQ14541 408 aa19■□□□□ 0.63
RRP9-201ENST00000232888 C5orf64Q2M2E5 130 aa19■□□□□ 0.63
RRP9-201ENST00000232888 PIP4P2Q8N4L2 257 aa19■□□□□ 0.63
RRP9-201ENST00000232888 FAM210AQ96ND0 272 aa19■□□□□ 0.63
RRP9-201ENST00000232888 C7orf69Q9H7B7 122 aa19■□□□□ 0.63
RRP9-201ENST00000232888 KCNIP2Q9NS61 270 aa19■□□□□ 0.63
RRP9-201ENST00000232888 HIF1ANQ9NWT6 349 aa19■□□□□ 0.63
RRP9-201ENST00000232888 RFNGQ9Y644 331 aa19■□□□□ 0.63
RRP9-201ENST00000232888 J3QLI3 93 aa18.99■□□□□ 0.63
RRP9-201ENST00000232888 TSPAN9O75954 239 aa18.99■□□□□ 0.63
RRP9-201ENST00000232888 TSPAN15O95858 294 aa18.99■□□□□ 0.63
RRP9-201ENST00000232888 PVRIGQ6DKI7 326 aa18.99■□□□□ 0.63
RRP9-201ENST00000232888 TREML4Q6UXN2 200 aa18.99■□□□□ 0.63
RRP9-201ENST00000232888 LFNGQ8NES3 379 aa18.99■□□□□ 0.63
RRP9-201ENST00000232888 BTBD17A6NE02 478 aa18.98■□□□□ 0.63
RRP9-201ENST00000232888 I3L521 148 aa18.98■□□□□ 0.63
RRP9-201ENST00000232888 TMEM11P17152 192 aa18.98■□□□□ 0.63
RRP9-201ENST00000232888 FHITP49789 147 aa18.98■□□□□ 0.63
RRP9-201ENST00000232888 RAB31Q13636 194 aa18.98■□□□□ 0.63
RRP9-201ENST00000232888 TMEM41BQ5BJD5 291 aa18.98■□□□□ 0.63
RRP9-201ENST00000232888 UTP20O75691 2785 aaKnown RBP18.98■□□□□ 0.63
RRP9-201ENST00000232888 SMCO3A2RU48 225 aa18.98■□□□□ 0.63
RRP9-201ENST00000232888 ARSJQ5FYB0 599 aaPredicted RBP18.98■□□□□ 0.63
RRP9-201ENST00000232888 SRSF12Q8WXF0 261 aaKnown RBP18.98■□□□□ 0.63
RRP9-201ENST00000232888 P2RX4Q99571 388 aa18.98■□□□□ 0.63
RRP9-201ENST00000232888 LSM4Q9Y4Z0 139 aaKnown RBP18.98■□□□□ 0.63
RRP9-201ENST00000232888 WNK2Q9Y3S1 2297 aa18.97■□□□□ 0.63
RRP9-201ENST00000232888 FCN1O00602 326 aa18.97■□□□□ 0.63
RRP9-201ENST00000232888 HBE1P02100 147 aa18.97■□□□□ 0.63
RRP9-201ENST00000232888 H2AFB1P0C5Y9 115 aa18.97■□□□□ 0.63
RRP9-201ENST00000232888 RAB2AP61019 212 aa18.97■□□□□ 0.63
RRP9-201ENST00000232888 GNB1P62873 340 aa18.97■□□□□ 0.63
RRP9-201ENST00000232888 CD69Q07108 199 aa18.97■□□□□ 0.63
RRP9-201ENST00000232888 Q5PR19 223 aa18.97■□□□□ 0.63
RRP9-201ENST00000232888 TEPPQ6URK8 271 aa18.97■□□□□ 0.63
RRP9-201ENST00000232888 MED13LQ71F56 2210 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 TRAV1-1A0A0B4J248 108 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 TEX22C9J3V5 150 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 KRBOX1C9JBD0 128 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 CNIH1O95406 144 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 CD24P25063 80 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 OPRK1P41145 380 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 SSBP2P81877 361 aaPredicted RBP18.96■□□□□ 0.63
RRP9-201ENST00000232888 ZNF562Q6V9R5 426 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 TMEM144Q7Z5S9 345 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 MEGF9Q9H1U4 602 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 RPRMQ9NS64 109 aa18.96■□□□□ 0.63
RRP9-201ENST00000232888 TRAV40A0A0B4J280 105 aa18.95■□□□□ 0.62
RRP9-201ENST00000232888 CORTO00230 105 aa18.95■□□□□ 0.62
RRP9-201ENST00000232888 PAX6P26367 422 aa18.95■□□□□ 0.62
RRP9-201ENST00000232888 OR1P1Q8NH06 330 aa18.95■□□□□ 0.62
RRP9-201ENST00000232888 BPIFB3P59826 476 aa18.94■□□□□ 0.62
RRP9-201ENST00000232888 AKR1C1Q04828 323 aa18.94■□□□□ 0.62
RRP9-201ENST00000232888 TOR2AQ5JU69 321 aa18.94■□□□□ 0.62
RRP9-201ENST00000232888 ETFRF1Q6IPR1 90 aa18.94■□□□□ 0.62
RRP9-201ENST00000232888 MBD3L1Q8WWY6 194 aa18.94■□□□□ 0.62
RRP9-201ENST00000232888 ABCA2Q9BZC7 2435 aa18.94■□□□□ 0.62
RRP9-201ENST00000232888 NCBP2LA6PVI3 153 aaKnown RBP18.93■□□□□ 0.62
RRP9-201ENST00000232888 FXYD3Q14802 87 aa18.93■□□□□ 0.62
RRP9-201ENST00000232888 OR1L6Q8NGR2 347 aa18.93■□□□□ 0.62
RRP9-201ENST00000232888 ZP3P21754 424 aa18.93■□□□□ 0.62
RRP9-201ENST00000232888 ACOT6Q3I5F7 207 aaPredicted RBP18.93■□□□□ 0.62
RRP9-201ENST00000232888 FFAR4Q5NUL3 377 aa18.93■□□□□ 0.62
RRP9-201ENST00000232888 SLC16A13Q7RTY0 426 aa18.93■□□□□ 0.62
RRP9-201ENST00000232888 SLC35E1Q96K37 410 aa18.93■□□□□ 0.62
RRP9-201ENST00000232888 MGST2Q99735 147 aa18.93■□□□□ 0.62
RRP9-201ENST00000232888 RNF223E7ERA6 249 aa18.92■□□□□ 0.62
RRP9-201ENST00000232888 AREGP15514 252 aa18.92■□□□□ 0.62
RRP9-201ENST00000232888 M6PRP20645 277 aa18.92■□□□□ 0.62
RRP9-201ENST00000232888 ELLP55199 621 aaPredicted RBP18.92■□□□□ 0.62
RRP9-201ENST00000232888 GAMTQ14353 236 aa18.92■□□□□ 0.62
RRP9-201ENST00000232888 RUSC1-AS1Q66K80 236 aa18.92■□□□□ 0.62
RRP9-201ENST00000232888 ACSM6Q6P461 480 aa18.92■□□□□ 0.62
RRP9-201ENST00000232888 GGTLC1Q9BX51 225 aa18.92■□□□□ 0.62
RRP9-201ENST00000232888 F11RQ9Y624 299 aaKnown RBP18.92■□□□□ 0.62
RRP9-201ENST00000232888 FBN2P35556 2912 aa18.91■□□□□ 0.62
RRP9-201ENST00000232888 RPL29P47914 159 aaKnown RBP18.91■□□□□ 0.62
RRP9-201ENST00000232888 FAM120AOSQ5T036 256 aa18.91■□□□□ 0.62
RRP9-201ENST00000232888 SPSB3Q6PJ21 355 aa18.91■□□□□ 0.62
RRP9-201ENST00000232888 SFT2D1Q8WV19 159 aa18.91■□□□□ 0.62
RRP9-201ENST00000232888 SSMEM1Q8WWF3 244 aa18.91■□□□□ 0.62
RRP9-201ENST00000232888 PBDC1Q9BVG4 233 aa18.91■□□□□ 0.62
RRP9-201ENST00000232888 FAM96BQ9Y3D0 163 aa18.91■□□□□ 0.62
RRP9-201ENST00000232888 TACC2O95359 2948 aa18.91■□□□□ 0.62
RRP9-201ENST00000232888 HLA-DRB1P01911 266 aa18.9■□□□□ 0.62
RRP9-201ENST00000232888 IGHV4-38-2P0DP08 117 aa18.9■□□□□ 0.62
RRP9-201ENST00000232888 FBLN7Q53RD9 439 aa18.9■□□□□ 0.62
RRP9-201ENST00000232888 Q8N9W7 124 aa18.9■□□□□ 0.62
RRP9-201ENST00000232888 RCC1LQ96I51 464 aaKnown RBP18.9■□□□□ 0.62
RRP9-201ENST00000232888 VSIRQ9H7M9 311 aa18.9■□□□□ 0.62
RRP9-201ENST00000232888 PTPN13Q12923 2485 aa18.9■□□□□ 0.62
RRP9-201ENST00000232888 AGPAT2O15120 278 aa18.89■□□□□ 0.62
RRP9-201ENST00000232888 CYB5BO43169 146 aa18.89■□□□□ 0.62
RRP9-201ENST00000232888 CX3CL1P78423 397 aa18.89■□□□□ 0.62
RRP9-201ENST00000232888 OR10G4Q8NGN3 311 aa18.89■□□□□ 0.62
RRP9-201ENST00000232888 OR10G9Q8NGN4 311 aa18.89■□□□□ 0.62
RRP9-201ENST00000232888 OR10G7Q8NGN6 311 aa18.89■□□□□ 0.62
RRP9-201ENST00000232888 ABHD5Q8WTS1 349 aa18.89■□□□□ 0.62
RRP9-201ENST00000232888 RASL11BQ9BPW5 248 aa18.89■□□□□ 0.62
RRP9-201ENST00000232888 ACTR3CQ9C0K3 210 aaPredicted RBP18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms