RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Pfn3Q9DAD6 137 aa8.4□□□□□ -1.06
Hmgb1-201ENSMUST00000085546 Susd2Q9DBX3 820 aa8.4□□□□□ -1.06
Hmgb1-201ENSMUST00000085546 Tns1E9Q0S6 1888 aaKnown RBP8.4□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Col4a6B1AVK5 1691 aa8.4□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Iglv1A0A075B663 117 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Trbv26A0A0B4J1P5 115 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm45716A0A1B0GRQ0 93 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Esp6A8R0U0 136 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Vmn1r138D3YTY2 306 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr39E9PVX1 319 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm8693E9PW18 306 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 BC030500E9Q6W0 185 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 9130019O22RikG3X941 543 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm4498K9J7G4 306 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Vmn1r118L7N273 306 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Best1O88870 551 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Phxr2P15972 65 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Sox1P53783 391 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 CortP56469 109 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr965Q7TRA7 312 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Tm2d3Q8BJ83 261 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Znf689Q8BKK5 500 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Q8C708 225 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr353Q8VGK0 311 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Rab28Q99KL7 221 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Spaca3Q9D9X8 221 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Q9DAN9 164 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Slc25a18Q9DB41 320 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 EsdQ9R0P3 282 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Igkv5-39A0A0G2JDV4 115 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Zfp334A2A4U6 679 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Igsf23B2RTN2 239 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Prr19B2RW88 366 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr250E9PV37 331 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Vmn1r176G3UW31 304 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Ninj1O70131 152 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Ammecr1lQ8JZZ6 310 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 C1qtnf4Q8R066 326 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Cd207Q8VBX4 331 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Ddb2Q99J79 432 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Fbxw4Q9JMJ2 410 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Fzr1Q9R1K5 493 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Trav16A0A075B653 116 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr1274-psA0A1L1SQ02 309 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr282A1L1B4 308 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr1104A2AVB5 310 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm20696H3BJN7 74 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Ntn1O09118 604 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 P01723 117 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Lcn2P11672 200 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Mas1P30554 324 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Htr5aP30966 357 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Hspb7P35385 169 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 RpiaP47968 303 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Elavl3Q60900 367 aaKnown RBP8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Defb21Q8C5Z4 100 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr223Q8VF69 319 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Mob1aQ921Y0 216 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Ndufb8Q9D6J5 186 aa8.39□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Trpm6Q8CIR4 2028 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Igkv12-38A0A0G2JEI7 115 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Zfp873A0A1B0GT64 667 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Vmn1r119E9Q4H3 307 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Fbxw25F7C9P2 466 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 OtpO09113 325 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Klf12O35738 402 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 CtsaP16675 474 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Plpp4Q0VBU9 271 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Ube2zQ3UE37 356 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 RalyQ64012 312 aaKnown RBP8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 GfralQ6SJE0 393 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Znf428Q8C1M2 176 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Tmem267Q8VDR5 215 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr186Q8VEX5 309 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Tppp3Q9CRB6 176 aaKnown RBP8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 CalyQ9DCA7 226 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 1110002E22RikE0CYV9 1786 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr742A2RTP5 311 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 A930017K11RikE0CXQ2 571 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm17657E9PWY5 170 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Wnt9bO35468 359 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Id3P41133 119 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 CamlgP49070 294 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Serf2P84102 59 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Spink11Q09TK7 88 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Zfp872Q3UVL3 465 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Fam173aQ501J2 229 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Paqr9Q6TCG2 375 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Klhl24Q8BRG6 600 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gpr4Q8BUD0 365 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Mettl7a1Q8C6B0 244 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Rhno1Q8K3A4 235 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 MrgprfQ8VCJ6 343 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr1336Q8VGH5 314 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 UmodQ91X17 642 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Cmtm2bQ9DAC0 210 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Vmn1r172Q9EPS4 313 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Prss21Q9JHJ7 324 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Col4a2P08122 1707 aa8.38□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm10778A0A087WNP5 499 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms