RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Vmn1r121K7N6J4 314 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cox5aP12787 146 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Rpl29P47915 160 aaKnown RBP8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Slc45a2P58355 530 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Glrx2Q923X4 156 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Ly6g6dQ9Z1Q3 135 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 StrapQ9Z1Z2 350 aaKnown RBP8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Trbv15A0A0A6YYE3 115 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cd46O88174 365 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Jmjd7P0C872 316 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Slc6a9P28571 692 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cd7P50283 210 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Adora3Q61618 319 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr1212Q7TR08 311 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Rbpms2Q8VC52 206 aaKnown RBP8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr803Q8VFI3 308 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Ms4a6bQ99N09 244 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 9130008F23RikQ9D2Z6 181 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Dmrtc1c1Q9D410 238 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Srp19Q9D7A6 144 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm28285A0A087WQ54 102 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Lrrc3cA0A1B0GRI5 255 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr896-ps1A0A1L1SRZ8 308 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr196E9PYP4 309 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Ankrd65F6YK91 380 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 CebpbP28033 296 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Mettl4Q3U034 471 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cln5Q3UMW8 341 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 GalnsQ571E4 520 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Trp53rkaQ5U452 244 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cfhr1Q61406 343 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 PnkdQ69ZP3 385 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Zfp874bQ7M6X2 447 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Coro2aQ8C0P5 524 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Lrrc25Q8K1T1 297 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Wasf3Q8VHI6 501 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Tp53rkQ99PW4 244 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Rnaseh2cQ9CQ18 166 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Wbp2nlQ9D529 359 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Fxyd1Q9Z239 92 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 TncQ80YX1 2110 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Myo15bI7HPW8 3033 aa8.37□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm4787B2RUD9 748 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Fut9O88819 359 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Ctxn2Q3URE8 81 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Psg19Q4KL31 475 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 MaoaQ64133 526 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Oxgr1Q6IYF8 337 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Slc46a1Q6PEM8 459 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 H2-M10.3Q85ZW6 330 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Crispld2Q8BZQ2 495 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Alkbh6Q8K2U2 238 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cldn10Q9Z0S6 231 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Dnajc13D4AFX7 2248 aaKnown RBP8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm21788J3QNH3 180 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 P01634 136 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Ceacam10Q61400 265 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Nmes1Q810Q5 83 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr1384Q8VFA8 318 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr1233Q8VGN0 305 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Map1lc3bQ9CQV6 125 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Ndufaf3Q9JKL4 185 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Trav15-2-dv6-2A0A075B650 123 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Mn1D3YWE6 1297 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Ldlrad2Q3V0V0 142 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Foxg1Q60987 481 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Spock1Q62288 442 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Zfp273Q7M6W8 501 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Zfp87Q8K2A4 540 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr360Q8VFP3 317 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Dok5Q91ZM9 306 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Mrpl41Q9CQN7 135 aaKnown RBP8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Mrpl30Q9D7N6 160 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gng12Q9DAS9 72 aa8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Timm9Q9WV98 89 aaKnown RBP8.36□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Trbv29A0A0G2LB96 114 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Tmem200bD3Z0P8 284 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr872E9PVW2 323 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm21834J3QN05 151 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 SdcbpO08992 299 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Wdr1O88342 606 aaKnown RBP8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Rps2P25444 293 aaKnown RBP8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gng3P63216 75 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 St6galnac2P70277 373 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 9030612E09RikQ8CE20 140 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 RhovQ8VDU1 236 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr802Q8VGJ2 312 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Rab4bQ91ZR1 213 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Nkx6-1Q99MA9 365 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 ApooQ9DCZ4 198 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Notch4P31695 1964 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Myo9bQ9QY06 2114 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Trav12-1A0N8R1 115 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm20821J3QPJ2 227 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Mtch1Q791T5 389 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr1294Q8VGE5 312 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Sf3b5Q923D4 86 aaKnown RBP8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Q9DAN9 164 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Vmn1r44Q9EQ47 310 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Asxl3Q8C4A5 2259 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms