RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Srsf10Q9R0U0 262 aaKnown RBP14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Pappa2E9PZ87 1789 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Tmem262D3Z338 116 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Znf784Q8BI69 297 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Olfr1230Q8VG58 305 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 H1fooQ8VIK3 304 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Cox20Q9D7J4 117 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Plpp1Q61469 283 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Fyttd1Q91Z49 317 aaKnown RBP14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Gm7714E9Q079 131 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 MestQ07646 335 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Tmem217Q14AF1 189 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Gucd1Q8BZI6 239 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Klk15Q8CGR4 254 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 9230110F15RikQ9D262 117 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Gm14408E9Q6B9 136 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Znf488Q5HZG9 337 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Cxcl3Q6W5C0 100 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Mogat2Q80W94 334 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Tmem38bQ9DAV9 292 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Trav23A0A0G2JG17 115 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Olfr1154L7MU57 310 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Il4P07750 140 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 GastP48757 101 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Znf2Q8BIQ3 427 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Gm9837Q8C607 126 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Wdr13Q91V09 485 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Irs3O54718 495 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Nudt22Q9DD16 308 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Tbx21Q9JKD8 530 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Chst5Q9QUP4 395 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Gm15013V9GWY0 266 aa14.66□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 RlfA2A7F4 1918 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Ighv1-43A0A0A6YXN5 117 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Defa13P50711 93 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Cnn1Q08091 297 aaKnown RBP14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Fbxw4Q9JMJ2 410 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 I0C0044D17RikA6PWL3 169 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Ppp2cbP62715 309 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Hist1h2baP70696 127 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Lrrc10Q8K3W2 274 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 A630095N17RikJ3KMM7 116 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Spns2Q91VM4 549 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Olfr508Q8VG42 310 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Olfr1404Q8VGE1 313 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 PdfS4R2K0 231 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Tnrc6aQ3UHK8 1896 aaKnown RBP14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Olfr152G3X9L8 316 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Vmn1r115K7N6Y3 295 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Rps27Q6ZWU9 84 aaKnown RBP14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Abhd12Q99LR1 398 aaKnown RBP14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Olfr481Q8VGI5 312 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Igkv12-46A0A140T8P6 115 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Il31Q6EAL8 163 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Hus1bQ8K572 276 aa14.65□□□□□ -0.06
Ccdc88a-201ENSMUST00000040182 Ighv6-5A0A0A6YWS9 119 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Igkv16-104A0A0B4J1I1 116 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 A0A286YCH8 300 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 3110040M04RikA0A286YDK0 300 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 A0A286YE43 300 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Ucp3P56501 308 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Trav6-2Q5R1I4 113 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Prg2Q61878 223 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 LiphQ8CIV3 451 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr1030Q8VFL5 318 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Vmn1r175K7N6T9 304 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Prss35Q8C0F9 409 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Rbfox1Q9JJ43 396 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 4930426L09RikE9Q0N7 123 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Defa37K9J724 93 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr898L7N1Z5 316 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Igsf6P0C6B7 237 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Defa5P28312 93 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Clec14aQ8VCP9 459 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Nrxn2E9Q7X7 1710 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 S100a4P07091 101 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gpx6Q91WR8 221 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tceal8Q9CZY2 117 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Vmn1r47Q9EQ51 310 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gm31371A0A1D5RM70 265 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tmem207P86045 143 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Trat1Q3UU67 187 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Lpar6Q8BMC0 344 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Mrm2Q9CPY0 246 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gm28305F6U473 122 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Cyb5r3Q9DCN2 301 aaKnown RBP14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Ear3O35290 156 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Fam57aQ5ND56 257 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr101Q920Z0 308 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Foxq1O70220 400 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Lrrc52Q5M8M9 314 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Tmem212Q8C6V3 187 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Dph7Q9CYU6 477 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Olfr954Q9EQB6 314 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gpx2Q9JHC0 190 aa14.64□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Oas1bQ60856 376 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Rnf122Q8BP31 155 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Mmp21Q8K3F2 568 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Gm12886B1AZM5 119 aa14.63□□□□□ -0.07
Ccdc88a-201ENSMUST00000040182 Defa30E9QPZ2 93 aa14.63□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms