RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 C030005K15RikQ8BQN9 115 aa12.79□□□□□ -0.36
Nup54-201ENSMUST00000038514 Nadk2Q8C5H8 452 aa12.79□□□□□ -0.36
Nup54-201ENSMUST00000038514 Vmn1r233Q8R294 319 aa12.79□□□□□ -0.36
Nup54-201ENSMUST00000038514 Ms4a6dQ99N07 247 aa12.79□□□□□ -0.36
Nup54-201ENSMUST00000038514 Slc50a1Q9CXK4 221 aa12.79□□□□□ -0.36
Nup54-201ENSMUST00000038514 Phf7Q9DAG9 307 aa12.79□□□□□ -0.36
Nup54-201ENSMUST00000038514 Jag2Q9QYE5 1247 aa12.79□□□□□ -0.36
Nup54-201ENSMUST00000038514 Olfr1264Q9R0K2 308 aa12.79□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm10666K7N6B8 321 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Vmn1r121K7N6J4 314 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 SellP18337 372 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Hoxd11P23813 323 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Lef1P27782 397 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Prss46Q5M8S2 314 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Slc34a1Q60825 637 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 BC049730Q810N3 246 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Olfr803Q8VFI3 308 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Olfr435Q8VFS3 313 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Tmem19Q91W52 336 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Fstl3Q9EQC7 256 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 2410004P03RikA0A087WQY2 205 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Kcnk15B2RVL1 343 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm5108J3QP01 101 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm20821J3QPJ2 227 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Phlda2O08969 144 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Ca11O70354 328 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Foxh1O88621 401 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Zfp36P22893 319 aaKnown RBP12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Zfp36l1P23950 338 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Rab11aP62492 216 aaKnown RBP12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Arf1P84078 181 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Hspb6Q5EBG6 162 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Taar8bQ5QD06 344 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Prss54Q7M756 383 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Mrps10Q80ZK0 160 aaKnown RBP12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm5447Q8BPB2 115 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 4922502D21RikQ8C634 189 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm5111Q8C9M4 190 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gas2l1Q8JZP9 678 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Tmprss3Q8K1T0 453 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Vrk3Q8K3G5 453 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 MrgprdQ91ZB8 321 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Zfp958Q99LG7 467 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Prok2Q9QXU7 128 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Rnd2Q9QYM5 227 aa12.78□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm5678A0A1B0GRG8 277 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm45871A0A1B0GRI9 540 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Vmn1r180B9EK86 305 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Npbwr1P49681 329 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 PmchP56942 165 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Zglp1Q1WG82 266 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm5615Q3UW02 101 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Vdac1Q60932 296 aaKnown RBP12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Cfhr1Q61406 343 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Bpifb3Q80ZU7 473 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Trib3Q8K4K2 354 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Polr3kQ9CQZ7 108 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Hdhd3Q9CYW4 251 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Pfdn5Q9WU28 154 aa12.77□□□□□ -0.36
Nup54-201ENSMUST00000038514 Iglv1A0A075B663 117 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Gm36864A0A1Y7VJE6 447 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Fpr2O88536 351 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 VhlP40338 181 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Htr2bQ02152 479 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 MpgQ04841 333 aaKnown RBP12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Olfr94Q6UAH0 386 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Crispld2Q8BZQ2 495 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Olfr1030Q8VFL5 318 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Olfr1444Q8VFX2 319 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Rab40cQ8VHQ4 281 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Mrpl49Q9CQ40 166 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Sgms2Q9D4B1 365 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 ApooQ9DCZ4 198 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Sfrp4Q9Z1N6 351 aa12.77□□□□□ -0.37
Nup54-201ENSMUST00000038514 Igkv14-100A0A0G2JG36 117 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Klri1B2KG20 248 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Ifna7P06799 190 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Nudt10P0C027 164 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Nudt11P0C028 164 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Il11P47873 199 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Cdk2P97377 346 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Tbrg1Q3UB74 406 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Klf3Q60980 344 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Gp49aQ61450 303 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Ifna16Q810G1 189 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Pdzd11Q9CZG9 140 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Igkv4-50A0A0B4J1J0 117 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Olfr1496B9EHG2 317 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Vmn1r34G3XA52 309 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Iglc3P01845 104 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 GzmbP04187 247 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Ifna6P07350 189 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Ca5aP23589 299 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 GrnP28798 589 aaKnown RBP12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Chrna7P49582 502 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Tle3Q08122 772 aaKnown RBP12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Taar5Q5QD14 337 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 FuomQ8R2K1 153 aa12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Nova1Q9JKN6 507 aaKnown RBP12.76□□□□□ -0.37
Nup54-201ENSMUST00000038514 Irf2bp2E9Q1P8 570 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms