RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Tmem107Q9CPV0 140 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 S1pr3Q9Z0U9 378 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Pcnx2Q5DU28 2122 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1029A2ATE0 324 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 CryzP47199 331 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Tex30Q3TUU5 225 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 PiglQ5SX19 252 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Slc24a5Q8C261 501 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr827Q8VEV5 322 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr181Q8VGQ7 317 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Polr3kQ9CQZ7 108 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 CsQ9CZU6 464 aaKnown RBP13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Mrps30Q9D0G0 442 aaKnown RBP13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Klk1b27Q9JM71 263 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Tns1E9Q0S6 1888 aaKnown RBP13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Amy2a1E9PV85 245 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr556E9Q549 324 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Vmn1r204I7HIK1 302 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Guca2aP33680 116 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Npy1rQ04573 382 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Mef2cQ8CFN5 474 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr186Q8VEX5 309 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Sgms2Q9D4B1 365 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Pdcd1lg2Q9WUL5 247 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm42543A0A0G2JET4 117 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Mettl23A2AA28 253 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm9376G3UW68 176 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 H2-LP01897 362 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Zfp36P22893 319 aaKnown RBP13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 UcnP81615 122 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr328Q5NCD3 310 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 5930422O12RikQ8C4Y4 123 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Sco2Q8VCL2 255 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr1239Q8VGM8 305 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Pmaip1Q9JM54 103 aa13.89□□□□□ -0.19
Trim28-201ENSMUST00000005705 Ighv1-42A0A0A6YY38 117 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Zfp114B2RRA8 586 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Muc3E9PWP7 378 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr555E9Q547 315 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr902E9Q6Z7 309 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm10665K7N6B7 321 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Lsm6P62313 80 aaKnown RBP13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Zfp7Q3TFZ4 685 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Tex52Q3TTI8 308 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gpr6Q6YNI2 363 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Osbpl11Q8CI95 751 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Tmem54Q9D7S1 219 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Sumo3Q9Z172 110 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Cxcl10P17515 98 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Rab19P35294 217 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Mcpt8P43430 247 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm5127Q3UQH6 212 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gm5447Q8BPB2 115 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 RtbdnQ8QZY4 247 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr483Q8VG05 315 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Shisal2bQ9D1Y9 158 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Sval1Q9D2X6 151 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 GrinaQ9ESF4 345 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr1326-ps1A0A140T8J7 311 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr896-ps1A0A1L1SRZ8 308 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Kdf1A2A9F4 397 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Cdhr4H3BJZ2 783 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Itgb2P11835 771 aaKnown RBP13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Rpl29P47915 160 aaKnown RBP13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Cd7P50283 210 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Tle3Q08122 772 aaKnown RBP13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Ifna15Q61718 190 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Cd226Q8K4F0 333 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Tm7sf3Q9CRG1 565 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 RprmQ9JJ72 109 aa13.88□□□□□ -0.19
Trim28-201ENSMUST00000005705 Rps2-ps6A0A140T8L5 221 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Kcnk15B2RVL1 343 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 CrpP14847 225 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Btf3Q64152 204 aaKnown RBP13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 PnlipQ6P8U6 465 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Wdyhv1Q80WB5 209 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gpr4Q8BUD0 365 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Q8CF25 301 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 RTRAFQ9CQE8 244 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Zcchc10Q9CX48 178 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr878Q9EQA9 314 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Ms4a4bQ9ES61 226 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Med13lQ6JPI3 2207 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Ccr2P51683 373 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 AgaQ64191 346 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 LgalslbQ7TPX9 165 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Galnt14Q8BVG5 550 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr1444Q8VFX2 319 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr354Q8VGJ8 317 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr980Q8VH08 310 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Chrdl1Q920C1 447 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Abhd12Q99LR1 398 aaKnown RBP13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Nova1Q9JKN6 507 aaKnown RBP13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Cd5lQ9QWK4 352 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Gabrg1Q9R0Y8 465 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Cldn14Q9Z0S3 239 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Adgrg4B7ZCC9 3073 aa13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 CenpeQ6RT24 2474 aaKnown RBP13.87□□□□□ -0.19
Trim28-201ENSMUST00000005705 Igkv14-126A0A075B5K0 117 aa13.86□□□□□ -0.19
Trim28-201ENSMUST00000005705 Olfr1097A2AVA9 315 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms