RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 LYPD6BQ8NI32 183 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 PPP1R35Q8TAP8 253 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 IL22RA2Q969J5 263 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 TMEM186Q96B77 213 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 RAB39BQ96DA2 213 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 PHYHIPLQ96FC7 376 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 SDSLQ96GA7 329 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 TSNAXQ99598 290 aaKnown RBP4.84□□□□□ -1.63
ATM-229ENST00000639953 PLEKHA2Q9HB19 425 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 SEBOXQ9HB31 216 aaPredicted RBP4.84□□□□□ -1.63
ATM-229ENST00000639953 MMP26Q9NRE1 261 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 CLN8Q9UBY8 286 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 WSB1Q9Y6I7 421 aa4.84□□□□□ -1.63
ATM-229ENST00000639953 NSD1Q96L73 2696 aaPredicted RBP4.83□□□□□ -1.64
ATM-229ENST00000639953 TRAV38-1A0A0B4J264 116 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 A0A1B0GU03 582 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 TMEM218A2RU14 115 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 SRRM4A7MD48 611 aaKnown RBP4.83□□□□□ -1.64
ATM-229ENST00000639953 ZNF705EA8MWA4 302 aaPredicted RBP4.83□□□□□ -1.64
ATM-229ENST00000639953 TRIM77I1YAP6 450 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 HSPA12AO43301 675 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 CRLF1O75462 422 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 MED6O75586 246 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 KRASP01116 189 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 IGKV1D-33P01593 117 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 IGKV1-33P01594 117 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 CD5P06127 495 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 FBP1P09467 338 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 M6PRP20645 277 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 C4BPBP20851 252 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 NFYBP25208 207 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 DUTP33316 252 aaKnown RBP4.83□□□□□ -1.64
ATM-229ENST00000639953 NUP62P37198 522 aaPredicted RBP4.83□□□□□ -1.64
ATM-229ENST00000639953 PAX5Q02548 391 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 SMCO1Q147U7 214 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 TMEM95Q3KNT9 176 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 GPR157Q5UAW9 335 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 TMEM182Q6ZP80 229 aaPredicted RBP4.83□□□□□ -1.64
ATM-229ENST00000639953 MOB1BQ7L9L4 216 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 PUSL1Q8N0Z8 303 aaKnown RBP4.83□□□□□ -1.64
ATM-229ENST00000639953 C11orf42Q8N5U0 333 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 ZNF645Q8N7E2 425 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 Q8N7P7 452 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 UBAC2Q8NBM4 344 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 OR8B3Q8NGG8 313 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 LSM10Q969L4 123 aaKnown RBP4.83□□□□□ -1.64
ATM-229ENST00000639953 AKR1E2Q96JD6 320 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 OR8B2Q96RD0 313 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 RARRES2Q99969 163 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 FAM234AQ9H0X4 552 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 ZC4H2Q9NQZ6 224 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 LYRM2Q9NU23 88 aaPredicted RBP4.83□□□□□ -1.64
ATM-229ENST00000639953 TAS2R3Q9NYW6 316 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 CALYQ9NYX4 217 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 MIOXQ9UGB7 285 aa4.83□□□□□ -1.64
ATM-229ENST00000639953 DOCK11Q5JSL3 2073 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 FN1P02751 2386 aaKnown RBP4.82□□□□□ -1.64
ATM-229ENST00000639953 LOC105371242A0A075B767 164 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 IGHV2-70DA0A0C4DH43 119 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 RNASEK-C17orf49H0YIS7 233 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 DVL1O14640 695 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 SPRY2O43597 315 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 FOXH1O75593 365 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 SNAPC5O75971 98 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 FSTL3O95633 263 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 METTL15P1P0C7V9 234 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 EDDM3BP56851 147 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 OR2B8PP59922 312 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 HTD2P86397 168 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 PAX2Q02962 417 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 HNF4GQ14541 408 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 HAGHQ16775 308 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 MRGPRG-AS1Q2M3A8 158 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 SMIM21Q3B7S5 101 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 WDR25Q64LD2 544 aaPredicted RBP4.82□□□□□ -1.64
ATM-229ENST00000639953 CCDC28AQ8IWP9 274 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 SPAG16Q8N0X2 631 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.82□□□□□ -1.64
ATM-229ENST00000639953 OR5C1Q8NGR4 320 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 TCTEX1D2Q8WW35 142 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 GALMQ96C23 342 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 RSG1Q9BU20 258 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 PSENENQ9NZ42 101 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 KCNIP1Q9NZI2 227 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 MMP24Q9Y5R2 645 aa4.82□□□□□ -1.64
ATM-229ENST00000639953 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.81□□□□□ -1.647e-8■■■□□ 16.4
ATM-229ENST00000639953 CSPG4Q6UVK1 2322 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 IGHV3OR16-10A0A075B7F0 116 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 DUXBA0A1W2PPF3 345 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 RAB19A4D1S5 217 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 C15orf62A8K5M9 175 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 M0R1X1 148 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 TAAR5O14804 337 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 RAB29O14966 203 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 SYNGR2O43760 224 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 YPEL1O60688 119 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 FCGR3BO75015 233 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 APOC3P02656 99 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 SERPINE2P07093 398 aa4.81□□□□□ -1.64
ATM-229ENST00000639953 SEC11BP0C7V7 166 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms