RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 AGPAT3Q9NRZ7 376 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 EURLQ9NYK6 297 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 COQ4Q9Y3A0 265 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 MYO7AQ13402 2215 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 SPAG17Q6Q759 2223 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 KMT2AQ03164 3969 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 NCOR1O75376 2440 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 SONP18583 2426 aaKnown RBP-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 MYO18BQ8IUG5 2567 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 URB1O60287 2271 aaKnown RBP-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 AKAP13Q12802 2813 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 ALMS1Q8TCU4 4167 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 CADP27708 2225 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 TENM4Q6N022 2769 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 TENM2Q9NT68 2774 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 RYR2Q92736 4967 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 CCDC168Q8NDH2 2452 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 CHD6Q8TD26 2715 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 DNHD1Q96M86 4753 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 TTC21AQ8NDW8 1320 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 ACACAQ13085 2346 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 USP9YO00507 2555 aaPredicted RBP-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 MKRN2OSH3BPM6 223 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 OR2T1O43869 369 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 NEMFO60524 1076 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 IGHV3-7P01780 117 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 CLPSP04118 112 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 NFYAP23511 347 aaPredicted RBP-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 ZNF93P35789 620 aaPredicted RBP-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 RAB13P51153 203 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 SBSNQ6UWP8 590 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 UBL4BQ8N7F7 174 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 OR5B17Q8NGF7 314 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 SLC22A4Q9H015 551 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 CFAP45Q9UL16 551 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 ANAPC10Q9UM13 185 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 FAT3Q8TDW7 4589 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 CACNA1AO00555 2505 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 TNXBP22105 4242 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 HIVEP1P15822 2718 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 SPTA1P02549 2419 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 FLNBO75369 2602 aaKnown RBP-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 CNOT1A5YKK6 2376 aaKnown RBP-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 NF1P21359 2839 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 ABCA12Q86UK0 2595 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 CHD8Q9HCK8 2581 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 ANK2Q01484 3957 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 CNTRLQ7Z7A1 2325 aa-0.05□□□□□ -2.42
CCDC7-211ENST00000638889 SRRM2Q9UQ35 2752 aaKnown RBP-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 FASNP49327 2511 aaKnown RBP-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 ITPR3Q14573 2671 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 ASCC3Q8N3C0 2202 aaKnown RBP-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 DNAH2Q9P225 4427 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 ABCA13Q86UQ4 5058 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 UNC79Q9P2D8 2635 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 LRP1BQ9NZR2 4599 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 MUC4Q99102 2169 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 POLQO75417 2590 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 USP9XQ93008 2570 aaPredicted RBP-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 PIEZO2Q9H5I5 2752 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 FUOMA2VDF0 154 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 FTCDNL1E5RQL4 147 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 KRT75O95678 551 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 KRT7P08729 469 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 RD3LP0DJH9 198 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 CLDN12P56749 244 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 SUPT4H1P63272 117 aaKnown RBP-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 TNFAIP8L3Q5GJ75 292 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 CRLF3Q8IUI8 442 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 TMEM251Q8N6I4 163 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 Q8N814 137 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 ERMAPQ96PL5 475 aaPredicted RBP-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 AMELYQ99218 206 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 MS4A6AQ9H2W1 248 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 CXorf21Q9HAI6 301 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 GPR84Q9NQS5 396 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 KLK9Q9UKQ9 250 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 HSPG2P98160 4391 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 ABCA1O95477 2261 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 PKD1L2Q7Z442 2459 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 NBEAL1Q6ZS30 2694 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 PKHD1P08F94 4074 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 KNTC1P50748 2209 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 KIAA0100Q14667 2235 aaKnown RBP-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 CACNA1HO95180 2353 aa-0.06□□□□□ -2.42
CCDC7-211ENST00000638889 OTOGQ6ZRI0 2925 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 MGAM2Q2M2H8 2515 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 RIF1Q5UIP0 2472 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 GVINP1Q7Z2Y8 2422 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 SPG11Q96JI7 2443 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 MUC17Q685J3 4493 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 PKHD1L1Q86WI1 4243 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 SPTBN1Q01082 2364 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 ZDBF2Q9HCK1 2354 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 I3L521 148 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 LST1O00453 97 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 S100A7P31151 101 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 BRS3P32247 399 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms