RNA–Protein interactions for RNA: ENST00000637110.1

CLN3-257, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 565 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-257ENST00000637110 IGLV1-51P01701 117 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 HLA-AP01891 365 aaKnown RBP8.86□□□□□ -0.99
CLN3-257ENST00000637110 CD3DP04234 171 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 OR13C7P0DN81 318 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 SCGB2B2Q4G0G5 96 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 SLC25A24Q6NUK1 477 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 H2BFWTQ7Z2G1 175 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 SGPP2Q8IWX5 399 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 OR10W1Q8NGF6 305 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 RAB2BQ8WUD1 216 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 FANCD2OSQ96PS1 177 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 ABHD1Q96SE0 405 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 ZC4H2Q9NQZ6 224 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 PRNDQ9UKY0 176 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 HYDINQ4G0P3 5121 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 IGLC7A0M8Q6 106 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 RAB3DO95716 219 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 SERPINE2P07093 398 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 CSN3P07498 182 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 PI3P19957 117 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 PPP5CP53041 499 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 TMBIM6P55061 237 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 UCP3P55916 312 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 TAS2R19P59542 299 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 IL18Q14116 193 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 FAM106AQ4KMX7 169 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 ZNF585BQ52M93 769 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 THOC7Q6I9Y2 204 aaKnown RBP8.85□□□□□ -0.99
CLN3-257ENST00000637110 LCN12Q6JVE5 192 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 IL34Q6ZMJ4 242 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 HSD17B13Q7Z5P4 300 aaPredicted RBP8.85□□□□□ -0.99
CLN3-257ENST00000637110 LAX1Q8IWV1 398 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 OR4A16Q8NH70 328 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 LSM10Q969L4 123 aaKnown RBP8.85□□□□□ -0.99
CLN3-257ENST00000637110 DIRAS2Q96HU8 199 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 CXorf58Q96LI9 332 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 TSC22D3Q99576 134 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 SRSF8Q9BRL6 282 aaKnown RBP8.85□□□□□ -0.99
CLN3-257ENST00000637110 C6orf62Q9GZU0 229 aaPredicted RBP8.85□□□□□ -0.99
CLN3-257ENST00000637110 ZMAT4Q9H898 229 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 FKBP11Q9NYL4 201 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 MTFP1Q9UDX5 166 aa8.85□□□□□ -0.99
CLN3-257ENST00000637110 IGLV11-55A0A075B6I3 123 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 TRBV7-1A0A0A6YYK4 115 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 CCDC160A6NGH7 325 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 GABARAPH6UMI1 98 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 TPPPO94811 219 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 CLEC3BP05452 202 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 FRMD6-AS1P0C7T7 363 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 TBPP20226 339 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 RPL5P46777 297 aaKnown RBP8.84□□□□□ -0.99
CLN3-257ENST00000637110 PIGPP57054 158 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 STEAP1BQ6NZ63 245 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 ADAMTSL5Q6ZMM2 481 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 GTSCR1Q86UQ5 136 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 Q8N402 240 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 ARRDC1Q8N5I2 433 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 TMEM229BQ8NBD8 167 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 TMEM56Q96MV1 263 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 CITED4Q96RK1 184 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 MIXL1Q9H2W2 232 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 COPZ2Q9P299 210 aa8.84□□□□□ -0.99
CLN3-257ENST00000637110 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
CLN3-257ENST00000637110 MFSD2BA6NFX1 497 aa8.83□□□□□ -1
CLN3-257ENST00000637110 FGF2P09038 288 aa8.83□□□□□ -1
CLN3-257ENST00000637110 GPR183P32249 361 aa8.83□□□□□ -1
CLN3-257ENST00000637110 MRPS10P82664 201 aaKnown RBP8.83□□□□□ -1
CLN3-257ENST00000637110 TRIM16LQ309B1 348 aa8.83□□□□□ -1
CLN3-257ENST00000637110 PLET1Q6UQ28 207 aa8.83□□□□□ -1
CLN3-257ENST00000637110 GDPD1Q8N9F7 314 aa8.83□□□□□ -1
CLN3-257ENST00000637110 CCDC71LQ8N9Z2 235 aa8.83□□□□□ -1
CLN3-257ENST00000637110 OR5B3Q8NH48 314 aa8.83□□□□□ -1
CLN3-257ENST00000637110 RNASE11Q8TAA1 199 aaKnown RBP8.83□□□□□ -1
CLN3-257ENST00000637110 ZFAND1Q8TCF1 268 aa8.83□□□□□ -1
CLN3-257ENST00000637110 MRGPRFQ96AM1 343 aa8.83□□□□□ -1
CLN3-257ENST00000637110 ZNF486Q96H40 463 aaPredicted RBP8.83□□□□□ -1
CLN3-257ENST00000637110 CCDC140Q96MF4 163 aa8.83□□□□□ -1
CLN3-257ENST00000637110 BCL7BQ9BQE9 202 aa8.83□□□□□ -1
CLN3-257ENST00000637110 TUBA4BQ9H853 241 aa8.83□□□□□ -1
CLN3-257ENST00000637110 NDUFA4L2Q9NRX3 87 aa8.83□□□□□ -1
CLN3-257ENST00000637110 FAM212BQ9NTI7 297 aaPredicted RBP8.83□□□□□ -1
CLN3-257ENST00000637110 CCDC59Q9P031 241 aaKnown RBP8.83□□□□□ -1
CLN3-257ENST00000637110 HUWE1Q7Z6Z7 4374 aaKnown RBP8.82□□□□□ -1
CLN3-257ENST00000637110 IGHV3-35A0A0C4DH35 117 aa8.82□□□□□ -1
CLN3-257ENST00000637110 RBMY1BA6NDE4 496 aaKnown RBP8.82□□□□□ -1
CLN3-257ENST00000637110 RBMY1EA6NEQ0 496 aaKnown RBP8.82□□□□□ -1
CLN3-257ENST00000637110 C2orf70A6NJV1 201 aa8.82□□□□□ -1
CLN3-257ENST00000637110 DISC1C4P0D8 188 aa8.82□□□□□ -1
CLN3-257ENST00000637110 ATG12O94817 140 aa8.82□□□□□ -1
CLN3-257ENST00000637110 RBMY1DP0C7P1 496 aaKnown RBP8.82□□□□□ -1
CLN3-257ENST00000637110 FOLR2P14207 255 aa8.82□□□□□ -1
CLN3-257ENST00000637110 AKR1C2P52895 323 aa8.82□□□□□ -1
CLN3-257ENST00000637110 WT1-ASQ06250 92 aa8.82□□□□□ -1
CLN3-257ENST00000637110 GUCA2BQ16661 112 aa8.82□□□□□ -1
CLN3-257ENST00000637110 GPHB5Q86YW7 130 aa8.82□□□□□ -1
CLN3-257ENST00000637110 SBSPONQ8IVN8 264 aa8.82□□□□□ -1
CLN3-257ENST00000637110 UBAC2Q8NBM4 344 aa8.82□□□□□ -1
CLN3-257ENST00000637110 OR4D10Q8NGI6 311 aa8.82□□□□□ -1
CLN3-257ENST00000637110 TERB2Q8NHR7 220 aa8.82□□□□□ -1
CLN3-257ENST00000637110 DYNC2LI1Q8TCX1 351 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms