RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 METTL1Q9UBP6 276 aaKnown RBP6.05□□□□□ -1.44
PTP4A1-206ENST00000627002 SIGLEC9Q9Y336 463 aa6.05□□□□□ -1.44
PTP4A1-206ENST00000627002 NDUFA3O95167 84 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 TGFAP01135 160 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 IFNA5P01569 189 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 SNRNP70P08621 437 aaKnown RBP6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 TMEM11P17152 192 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 NPY1RP25929 384 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 CNTFRP26992 372 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 HTR2BP41595 481 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 ERHP84090 104 aaKnown RBP6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 SLC38A11Q08AI6 406 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 CLINT1Q14677 625 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 TMEM249Q2WGJ8 235 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 CYB5R2Q6BCY4 276 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 OR8G2PQ6IF36 304 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 ALKAL2Q6UX46 152 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 CLEC9AQ6UXN8 241 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 SPNS3Q6ZMD2 512 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 HSD17B13Q7Z5P4 300 aaPredicted RBP6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 Q8N6K4 173 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 TMEM217Q8N7C4 229 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 SLC24A4Q8NFF2 622 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 OR10P1Q8NGE3 313 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 C17orf50Q8WW18 174 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 BSCL2Q96G97 398 aaPredicted RBP6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 AJUBAQ96IF1 538 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 SRSF8Q9BRL6 282 aaKnown RBP6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 GINS3Q9BRX5 216 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 GGACTQ9BVM4 153 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 HINT2Q9BX68 163 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 PARD6GQ9BYG4 376 aaPredicted RBP6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 MEGF9Q9H1U4 602 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 ARV1Q9H2C2 271 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 WFDC1Q9HC57 220 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 PGPEP1Q9NXJ5 209 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 C1RLQ9NZP8 487 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 FAM96BQ9Y3D0 163 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 FBN2P35556 2912 aa6.04□□□□□ -1.44
PTP4A1-206ENST00000627002 C15orf62A8K5M9 175 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 FBP1P09467 338 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 SNCAP37840 140 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 RPL27AP46776 148 aaKnown RBP6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 COMPP49747 757 aaPredicted RBP6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 SUB1P53999 127 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 HNF4GQ14541 408 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 TNXAQ16473 311 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 C5orf64Q2M2E5 130 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 C2orf83Q53S99 150 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 RUSC1-AS1Q66K80 236 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 SLC25A24Q6NUK1 477 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 ETV3LQ6ZN32 361 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 TEX29Q8N6K0 151 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 LRRC20Q8TCA0 184 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 SCGB1C1Q8TD33 95 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 RBMXL1Q96E39 390 aaKnown RBP6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 GNPNAT1Q96EK6 184 aaPredicted RBP6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 TMEM147Q9BVK8 224 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 SLC25A32Q9H2D1 315 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 FBXL15Q9H469 300 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 TPSG1Q9NRR2 321 aa6.03□□□□□ -1.44
PTP4A1-206ENST00000627002 YLPM1P49750 1951 aaKnown RBP6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 CSMD1Q96PZ7 3565 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 IGHV3OR16-10A0A075B7F0 116 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 A0A0U1RQK1 487 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 NCBP2LA6PVI3 153 aaKnown RBP6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 PMS2P5A8MQ11 134 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 FNDC10F2Z333 226 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 TSPAN9O75954 239 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 CNIH1O95406 144 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 CA2P00918 260 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 OPN1MWP04001 364 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 IFNA4P05014 189 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 SEC11BP0C7V7 166 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 OPN1MW2P0DN77 364 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 OPN1MW3P0DN78 364 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 IGHV4-38-2P0DP08 117 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 SPP1P10451 314 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 MYOD1P15172 320 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 CD24P25063 80 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 GNB1P62873 340 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 DLK1P80370 383 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 ARL16Q0P5N6 197 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 PJVKQ0ZLH3 352 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 AANATQ16613 207 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 MRGPRG-AS1Q2M3A8 158 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 VWC2Q2TAL6 325 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 BSXQ3C1V8 233 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 CLLU1Q5K131 121 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 HAPLN4Q86UW8 402 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 MAPK1IP1LQ8NDC0 245 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 RNF141Q8WVD5 230 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 UQCC1Q9NVA1 299 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 ITPR2Q14571 2701 aa6.02□□□□□ -1.45
PTP4A1-206ENST00000627002 CGB1A6NKQ9 187 aa6.01□□□□□ -1.45
PTP4A1-206ENST00000627002 RNASE2P10153 161 aaKnown RBP6.01□□□□□ -1.45
PTP4A1-206ENST00000627002 PAX6P26367 422 aa6.01□□□□□ -1.45
PTP4A1-206ENST00000627002 RAB5CP51148 216 aa6.01□□□□□ -1.45
PTP4A1-206ENST00000627002 LRRC75BQ2VPJ9 315 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms