RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 TPPPO94811 219 aa16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 RBMY1DP0C7P1 496 aaKnown RBP16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 PRSS3P35030 304 aa16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 HRH1P35367 487 aa16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 GUCA2BQ16661 112 aa16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 TMEM61Q8N0U2 210 aa16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 GPX8Q8TED1 209 aa16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 FUNDC2Q9BWH2 189 aa16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 HIPK2Q9H2X6 1198 aa16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 SLC2A8Q9NY64 477 aa16.7■□□□□ 0.26
NEDD4L-237ENST00000617539 ZNF320A2RRD8 509 aa16.69■□□□□ 0.26
NEDD4L-237ENST00000617539 HLA-DMAP28067 261 aa16.69■□□□□ 0.26
NEDD4L-237ENST00000617539 GPR183P32249 361 aa16.69■□□□□ 0.26
NEDD4L-237ENST00000617539 FAM106AQ4KMX7 169 aa16.69■□□□□ 0.26
NEDD4L-237ENST00000617539 GDPD1Q8N9F7 314 aa16.69■□□□□ 0.26
NEDD4L-237ENST00000617539 DGCR14Q96DF8 476 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-237ENST00000617539 COMMD3Q9UBI1 195 aa16.69■□□□□ 0.26
NEDD4L-237ENST00000617539 LPAR6P43657 344 aa16.68■□□□□ 0.26
NEDD4L-237ENST00000617539 MFAP2P55001 183 aa16.68■□□□□ 0.26
NEDD4L-237ENST00000617539 VBP1P61758 197 aa16.68■□□□□ 0.26
NEDD4L-237ENST00000617539 TM4SF20Q53R12 229 aa16.68■□□□□ 0.26
NEDD4L-237ENST00000617539 UXS1Q8NBZ7 420 aa16.68■□□□□ 0.26
NEDD4L-237ENST00000617539 PALMDQ9NP74 551 aa16.68■□□□□ 0.26
NEDD4L-237ENST00000617539 NDUFA4L2Q9NRX3 87 aa16.68■□□□□ 0.26
NEDD4L-237ENST00000617539 NSG2Q9Y328 171 aa16.68■□□□□ 0.26
NEDD4L-237ENST00000617539 IGHV3-35A0A0C4DH35 117 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 OR11H12B2RN74 326 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 GPR31O00270 319 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 KRASP01116 189 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 APOA1P02647 267 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 SERPINE2P07093 398 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 TRAPPC2P0DI81 140 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 TRAPPC2BP0DI82 140 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 OR13C7P0DN81 318 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 PTBP1P26599 531 aaKnown RBP eCLIP16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 G6PCP35575 357 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 ERVK-16P61578 105 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 OR6F1Q8NGZ6 308 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 FAM110AQ9BQ89 295 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 SRD5A3Q9H8P0 318 aa16.67■□□□□ 0.26
NEDD4L-237ENST00000617539 DBX1A6NMT0 343 aa16.66■□□□□ 0.26
NEDD4L-237ENST00000617539 PHLDA2Q53GA4 152 aa16.66■□□□□ 0.26
NEDD4L-237ENST00000617539 ZNF57Q68EA5 555 aaPredicted RBP16.66■□□□□ 0.26
NEDD4L-237ENST00000617539 THOC7Q6I9Y2 204 aaKnown RBP16.66■□□□□ 0.26
NEDD4L-237ENST00000617539 BTNL8Q6UX41 500 aa16.66■□□□□ 0.26
NEDD4L-237ENST00000617539 CMTM1Q8IZ96 169 aa16.66■□□□□ 0.26
NEDD4L-237ENST00000617539 CADM3Q8N126 398 aa16.66■□□□□ 0.26
NEDD4L-237ENST00000617539 OR1L8Q8NGR8 309 aa16.66■□□□□ 0.26
NEDD4L-237ENST00000617539 C8orf88P0DMB2 117 aa16.65■□□□□ 0.26
NEDD4L-237ENST00000617539 ELK1P19419 428 aa16.65■□□□□ 0.26
NEDD4L-237ENST00000617539 SNX29P2Q8IUI4 249 aa16.65■□□□□ 0.26
NEDD4L-237ENST00000617539 VN1R17PQ8TDU5 208 aa16.65■□□□□ 0.26
NEDD4L-237ENST00000617539 CMTM3Q96MX0 182 aa16.65■□□□□ 0.26
NEDD4L-237ENST00000617539 ZNF436Q9C0F3 470 aaPredicted RBP16.65■□□□□ 0.26
NEDD4L-237ENST00000617539 THYN1Q9P016 225 aa16.65■□□□□ 0.26
NEDD4L-237ENST00000617539 OR51B2Q9Y5P1 312 aa16.65■□□□□ 0.26
NEDD4L-237ENST00000617539 F8W735 103 aaPredicted RBP16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 TGOLN2O43493 480 aa16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 HPGDSO60760 199 aa16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 SCAF4O95104 1147 aaKnown RBP16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 IFNA6P05013 189 aa16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 PLET1Q6UQ28 207 aa16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 HSD17B13Q7Z5P4 300 aaPredicted RBP16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 LSM10Q969L4 123 aaKnown RBP16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 HINT2Q9BX68 163 aa16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 SCPEP1Q9HB40 452 aa16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 F11RQ9Y624 299 aaKnown RBP16.64■□□□□ 0.25
NEDD4L-237ENST00000617539 LCE6AA0A183 80 aa16.63■□□□□ 0.25
NEDD4L-237ENST00000617539 OR2T8A6NH00 312 aa16.63■□□□□ 0.25
NEDD4L-237ENST00000617539 IGKV1-39P01597 117 aa16.63■□□□□ 0.25
NEDD4L-237ENST00000617539 IGKV1D-39P04432 117 aa16.63■□□□□ 0.25
NEDD4L-237ENST00000617539 SLC25A24Q6NUK1 477 aa16.63■□□□□ 0.25
NEDD4L-237ENST00000617539 NAA50Q9GZZ1 169 aaKnown RBP16.63■□□□□ 0.25
NEDD4L-237ENST00000617539 TMEM14BQ9NUH8 114 aa16.63■□□□□ 0.25
NEDD4L-237ENST00000617539 IGHV3-21A0A0B4J1V1 117 aa16.62■□□□□ 0.25
NEDD4L-237ENST00000617539 RCVRNP35243 200 aa16.62■□□□□ 0.25
NEDD4L-237ENST00000617539 TBC1D26Q86UD7 250 aa16.62■□□□□ 0.25
NEDD4L-237ENST00000617539 TMEM190Q8WZ59 177 aa16.62■□□□□ 0.25
NEDD4L-237ENST00000617539 MARC2Q969Z3 335 aa16.62■□□□□ 0.25
NEDD4L-237ENST00000617539 ZNF414Q96IQ9 312 aa16.62■□□□□ 0.25
NEDD4L-237ENST00000617539 SMIM31A0A1B0GVY4 71 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 C15orf61A6NNL5 157 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 K7EIM0 57 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 SNAPC5O75971 98 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 SMIM18P0DKX4 95 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 ELLP55199 621 aaPredicted RBP16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 TSPAN5P62079 268 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 SLC16A13Q7RTY0 426 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 OR52B4Q8NGK2 314 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 SCARB1Q8WTV0 552 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 SEC22AQ96IW7 307 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 CHRDL1Q9BU40 450 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 FAM212BQ9NTI7 297 aaPredicted RBP16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 MRPL27Q9P0M9 148 aaKnown RBP16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 PRNDQ9UKY0 176 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 UFC1Q9Y3C8 167 aa16.61■□□□□ 0.25
NEDD4L-237ENST00000617539 M0QYG6 137 aa16.6■□□□□ 0.25
NEDD4L-237ENST00000617539 ADMP35318 185 aa16.6■□□□□ 0.25
NEDD4L-237ENST00000617539 CTF1Q16619 201 aa16.6■□□□□ 0.25
NEDD4L-237ENST00000617539 OR5B3Q8NH48 314 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms