RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
CBWD1-225ENST00000616944 NKX2-5P52952 324 aaPredicted RBP12.03□□□□□ -0.48
CBWD1-225ENST00000616944 TAS2R30P59541 319 aa12.03□□□□□ -0.48
CBWD1-225ENST00000616944 TNXAQ16473 311 aa12.03□□□□□ -0.48
CBWD1-225ENST00000616944 ZNF546Q86UE3 836 aa12.03□□□□□ -0.48
CBWD1-225ENST00000616944 SIGLECL1Q8N7X8 197 aa12.03□□□□□ -0.48
CBWD1-225ENST00000616944 DCUN1D4Q92564 292 aa12.03□□□□□ -0.48
CBWD1-225ENST00000616944 SMIM8Q96KF7 97 aa12.03□□□□□ -0.48
CBWD1-225ENST00000616944 LYRM2Q9NU23 88 aaPredicted RBP12.03□□□□□ -0.48
CBWD1-225ENST00000616944 CDC42EP3Q9UKI2 254 aa12.03□□□□□ -0.48
CBWD1-225ENST00000616944 VPREB3Q9UKI3 123 aa12.03□□□□□ -0.48
CBWD1-225ENST00000616944 IGHV7-81A0A0B4J1V7 117 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 MSGN1A6NI15 193 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 CEBPZOSA8MTT3 80 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 ARPC5O15511 151 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 HOXA3O43365 443 aaPredicted RBP12.02□□□□□ -0.49
CBWD1-225ENST00000616944 KCNAB3O43448 404 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 IAPPP10997 89 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 PVALBP20472 110 aaPredicted RBP12.02□□□□□ -0.49
CBWD1-225ENST00000616944 P2RY1P47900 373 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 NDPQ00604 133 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 LAMTOR1Q6IAA8 161 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 ZNF562Q6V9R5 426 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 OR10W1Q8NGF6 305 aa12.02□□□□□ -0.49
CBWD1-225ENST00000616944 SRSF12Q8WXF0 261 aaKnown RBP12.02□□□□□ -0.49
CBWD1-225ENST00000616944 NIPBLQ6KC79 2804 aaeCLIP12.02□□□□□ -0.49
CBWD1-225ENST00000616944 IGLC7A0M8Q6 106 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 TEX22C9J3V5 150 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 TSC22D2O75157 780 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 ACTL6BO94805 426 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 RPL27AP46776 148 aaKnown RBP12.01□□□□□ -0.49
CBWD1-225ENST00000616944 EIF2B2P49770 351 aaKnown RBP12.01□□□□□ -0.49
CBWD1-225ENST00000616944 CX3CL1P78423 397 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 WT1-ASQ06250 92 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 C9orf62Q8N4C0 152 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 OR2C3Q8N628 320 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 AQP10Q96PS8 301 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 CIB3Q96Q77 187 aaPredicted RBP12.01□□□□□ -0.49
CBWD1-225ENST00000616944 HSPB9Q9BQS6 159 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 PLEKHA3Q9HB20 300 aa12.01□□□□□ -0.49
CBWD1-225ENST00000616944 M0QZK8 103 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 LY86O95711 162 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 CXCL2P19875 107 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 HOXA1P49639 335 aaPredicted RBP12□□□□□ -0.49
CBWD1-225ENST00000616944 GNB1P62873 340 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 ZNF345Q14585 488 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 BSXQ3C1V8 233 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 LGALSLQ3ZCW2 172 aaPredicted RBP12□□□□□ -0.49
CBWD1-225ENST00000616944 RASL11BQ9BPW5 248 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 BTBD17A6NE02 478 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 H3BP45 60 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 L7N2F9 121 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 GPR137BO60478 399 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 HKR1P10072 659 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 SRD5A1P18405 259 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 VAMP2P63027 116 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 SCGB2A2Q13296 93 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 FXYD3Q14802 87 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 TMEM86BQ8N661 226 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 TMEM252Q8N6L7 170 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 TMEM170AQ8WVE7 144 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 OR4C12Q96R67 309 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 HINT2Q9BX68 163 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 PSENENQ9NZ42 101 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 FBXO7Q9Y3I1 522 aa12□□□□□ -0.49
CBWD1-225ENST00000616944 A0A1W2PN81 502 aa11.99□□□□□ -0.49
CBWD1-225ENST00000616944 IGSF23A1L1A6 192 aa11.99□□□□□ -0.49
CBWD1-225ENST00000616944 FAM24AA6NFZ4 105 aa11.99□□□□□ -0.49
CBWD1-225ENST00000616944 EGR2P11161 476 aaPredicted RBP11.99□□□□□ -0.49
CBWD1-225ENST00000616944 RPL12P30050 165 aaKnown RBP11.99□□□□□ -0.49
CBWD1-225ENST00000616944 CHRNA7P36544 502 aa11.99□□□□□ -0.49
CBWD1-225ENST00000616944 RPL23AP62750 156 aaKnown RBP11.99□□□□□ -0.49
CBWD1-225ENST00000616944 TMEM14EPQ6UXP3 125 aa11.99□□□□□ -0.49
CBWD1-225ENST00000616944 ACOT7LQ6ZUV0 252 aa11.99□□□□□ -0.49
CBWD1-225ENST00000616944 Q71RC1 249 aaPredicted RBP11.99□□□□□ -0.49
CBWD1-225ENST00000616944 ARPC1AQ92747 370 aa11.99□□□□□ -0.49
CBWD1-225ENST00000616944 SRSF8Q9BRL6 282 aaKnown RBP11.99□□□□□ -0.49
CBWD1-225ENST00000616944 MFFQ9GZY8 342 aa11.99□□□□□ -0.49
CBWD1-225ENST00000616944 HIPK2Q9H2X6 1198 aa11.99□□□□□ -0.49
CBWD1-225ENST00000616944 HEYLQ9NQ87 328 aaPredicted RBP11.99□□□□□ -0.49
CBWD1-225ENST00000616944 SH2D7A6NKC9 451 aaPredicted RBP11.98□□□□□ -0.49
CBWD1-225ENST00000616944 C15orf62A8K5M9 175 aa11.98□□□□□ -0.49
CBWD1-225ENST00000616944 INAFM1C9JVW0 142 aa11.98□□□□□ -0.49
CBWD1-225ENST00000616944 CNIH1O95406 144 aa11.98□□□□□ -0.49
CBWD1-225ENST00000616944 CAV2P51636 162 aa11.98□□□□□ -0.49
CBWD1-225ENST00000616944 OR2F1Q13607 317 aa11.98□□□□□ -0.49
CBWD1-225ENST00000616944 ASPHD1Q5U4P2 390 aa11.98□□□□□ -0.49
CBWD1-225ENST00000616944 INO80EQ8NBZ0 244 aaPredicted RBP11.98□□□□□ -0.49
CBWD1-225ENST00000616944 U3KQ87 197 aa11.98□□□□□ -0.49
CBWD1-225ENST00000616944 PMS2P5A8MQ11 134 aa11.97□□□□□ -0.49
CBWD1-225ENST00000616944 AREGP15514 252 aa11.97□□□□□ -0.49
CBWD1-225ENST00000616944 EWSR1Q01844 656 aaKnown RBP eCLIP11.97□□□□□ -0.49
CBWD1-225ENST00000616944 SPANXN5Q5MJ07 72 aa11.97□□□□□ -0.49
CBWD1-225ENST00000616944 HSD17B13Q7Z5P4 300 aaPredicted RBP11.97□□□□□ -0.49
CBWD1-225ENST00000616944 KCNRGQ8N5I3 272 aa11.97□□□□□ -0.49
CBWD1-225ENST00000616944 ZNF114Q8NC26 417 aa11.97□□□□□ -0.49
CBWD1-225ENST00000616944 SLC24A4Q8NFF2 622 aa11.97□□□□□ -0.49
CBWD1-225ENST00000616944 FAM103A1Q9BTL3 118 aaKnown RBP11.97□□□□□ -0.49
CBWD1-225ENST00000616944 ENY2Q9NPA8 101 aa11.97□□□□□ -0.49
CBWD1-225ENST00000616944 ESM1Q9NQ30 184 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms