RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-233	ENST00000612121	RHPN1-AS1	Q9BWJ2	59 aa		11.21	□□□□□ -0.61
LTBP4-233	ENST00000612121	HRASLS	Q9HDD0	168 aa		11.21	□□□□□ -0.61
LTBP4-233	ENST00000612121	TAS2R8	Q9NYW2	309 aa		11.21	□□□□□ -0.61
LTBP4-233	ENST00000612121	LSM2	Q9Y333	95 aa	Known RBP	11.21	□□□□□ -0.61
LTBP4-233	ENST00000612121	IGKV3-7	A0A075B6H7	116 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	TRAV3	A0A0B4J244	114 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	GIG44	P09565	113 aa	Predicted RBP	11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	GADD45A	P24522	165 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	ZNF66	Q6ZN08	573 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	C10orf67	Q8IYJ2	551 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	GBGT1	Q8N5D6	347 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	GDPD1	Q8N9F7	314 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	TMEM116	Q8NCL8	245 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	BPIFB6	Q8NFQ5	453 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	OR10W1	Q8NGF6	305 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	SCARB1	Q8WTV0	552 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	MND1	Q9BWT6	205 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	C21orf62	Q9NYP8	219 aa		11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	ELF5	Q9UKW6	265 aa	Predicted RBP	11.2	□□□□□ -0.62
LTBP4-233	ENST00000612121	LRP1B	Q9NZR2	4599 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	IGHV3-49	A0A0A0MS15	119 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	IGHV3-21	A0A0B4J1V1	117 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	UPK2	O00526	184 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	CYB5B	O43169	146 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	CTXN2	P0C2S0	81 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	MIF	P14174	115 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	DTYMK	P23919	212 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	RANBP1	P43487	201 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	SPHAR	Q15513	63 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	HES5	Q5TA89	166 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	LIPK	Q5VXJ0	399 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	SLC25A24	Q6NUK1	477 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	AIFM2	Q9BRQ8	373 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	QTRT1	Q9BXR0	403 aa	Known RBP	11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	COMMD5	Q9GZQ3	224 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121		V9GY05	133 aa		11.19	□□□□□ -0.62
LTBP4-233	ENST00000612121	AGRN	O00468	2067 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	ERICH4	A6NGS2	130 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	ARL6IP5	O75915	188 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	SERPINE2	P07093	398 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	CTSG	P08311	255 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	GNAO1	P09471	354 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	WT1-AS	Q06250	92 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	LEMD1	Q68G75	181 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121		Q6ZR54	194 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	DHRSX	Q8N5I4	330 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	OR10C1	Q96KK4	312 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121		X6R8D5	127 aa		11.18	□□□□□ -0.62
LTBP4-233	ENST00000612121	DEFB131B	A0A096LNP1	70 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121		K7EIM0	57 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	OR13C7	P0DN81	318 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	CALR	P27797	417 aa	Known RBP	11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	DEFB131A	P59861	70 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	RPS25	P62851	125 aa	Known RBP	11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	POU2AF1	Q16633	256 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	C12orf74	Q32Q52	190 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	CENPS	Q8N2Z9	138 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	UBAC2	Q8NBM4	344 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	UFD1	Q92890	307 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	CMTM3	Q96MX0	182 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	SCRT1	Q9BWW7	348 aa		11.17	□□□□□ -0.62
LTBP4-233	ENST00000612121	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	9e-13	■□□□□ 11
LTBP4-233	ENST00000612121	TNFSF12	O43508	249 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	CDK2AP2	O75956	126 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	DFFB	O76075	338 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	FGF2	P09038	288 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	RAB6A	P20340	208 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	TAS2R31	P59538	309 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	PAFAH1B2	P68402	229 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121		Q56UQ5	140 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	CNIH2	Q6PI25	160 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	SPAG16	Q8N0X2	631 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	MAPKAPK5-AS1	Q8N8E1	139 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	NDUFAF3	Q9BU61	184 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	CELA1	Q9UNI1	258 aa		11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	F11R	Q9Y624	299 aa	Known RBP	11.16	□□□□□ -0.62
LTBP4-233	ENST00000612121	APOB	P04114	4563 aa	Known RBP	11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	IGHV3OR16-13	A0A075B7E8	117 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	TRAV14DV4	A0A0A6YYC5	116 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	IGHV3-74	A0A0B4J1X5	117 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	TEX50	A0A1B0GTY4	177 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	TRAPPC2	P0DI81	140 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	TRAPPC2B	P0DI82	140 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	TMEM41B	Q5BJD5	291 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	THOC7	Q6I9Y2	204 aa	Known RBP	11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	ZNF773	Q6PK81	442 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	ZNF767P	Q75MW2	155 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	TCF24	Q7RTU0	167 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	FAM24B	Q8N5W8	94 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	DGCR14	Q96DF8	476 aa	Known RBP	11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	DCSTAMP	Q9H295	470 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	MS4A6A	Q9H2W1	248 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	TMEM140	Q9NV12	185 aa		11.15	□□□□□ -0.62
LTBP4-233	ENST00000612121	IGLV2-18	A0A075B6J9	118 aa		11.14	□□□□□ -0.63
LTBP4-233	ENST00000612121	METTL21EP	A6NDL7	271 aa		11.14	□□□□□ -0.63
LTBP4-233	ENST00000612121	NUPL2	O15504	423 aa	Known RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms