RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-217ENST00000611848 OR10X1Q8NGY0 326 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 LEAP2Q969E1 77 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 GNPNAT1Q96EK6 184 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-217ENST00000611848 YPEL2Q96QA6 119 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 ATP5SQ99766 215 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 TMEM231Q9H6L2 316 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 TNFRSF19Q9NS68 423 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 VPREB3Q9UKI3 123 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 HILPDAQ9Y5L2 63 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 FBN1P35555 2871 aaKnown RBP7.09□□□□□ -1.27
SMAD4-217ENST00000611848 LOC105371267A0A1B0GV96 52 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 A0A1B0GW64 132 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 C9JQL5 133 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 LY6LH3BQJ8 138 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 H3BUX3 64 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 RAMP3O60896 148 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 DFFBO76075 338 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 NXPH3O95157 252 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 IGHV3-7P01780 117 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 IL3RAP26951 378 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 BRS3P32247 399 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 FHITP49789 147 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 GNG10P50151 68 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 MORN2Q502X0 79 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 UTF1Q5T230 341 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 TPTE2P1Q5T6R2 138 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 TMEM182Q6ZP80 229 aaPredicted RBP7.09□□□□□ -1.28
SMAD4-217ENST00000611848 SLC25A48Q6ZT89 311 aaKnown RBP7.09□□□□□ -1.28
SMAD4-217ENST00000611848 STX12Q86Y82 276 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 OR2G3Q8NGZ4 309 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 RPEQ96AT9 228 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 HSD17B10Q99714 261 aaKnown RBP7.09□□□□□ -1.28
SMAD4-217ENST00000611848 MDFIQ99750 246 aa7.09□□□□□ -1.28
SMAD4-217ENST00000611848 A0A1W2PPE3 182 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 TMEM89A2RUT3 159 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 FAM181BA6NEQ2 426 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 ITGB1BP1O14713 200 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 EREGO14944 169 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 RAB29O14966 203 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 AGPAT2O15120 278 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 S1PR2O95136 353 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 PRH1P02810 166 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 CRYBA1P05813 215 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 SFTA3P0C7M3 94 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 PAX6P26367 422 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 RAB7AP51149 207 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 TNFRSF9Q07011 255 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 TMEM217Q8N7C4 229 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 ZNF439Q8NDP4 499 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 LFNGQ8NES3 379 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 PIFOQ8TCI5 191 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 EDARADDQ8WWZ3 215 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 ZFAND3Q9H8U3 227 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 PSENENQ9NZ42 101 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 HSPB7Q9UBY9 170 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 PITPNC1Q9UKF7 332 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 GAB2Q9UQC2 676 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 TCF19Q9Y242 345 aa7.08□□□□□ -1.28
SMAD4-217ENST00000611848 STAB1Q9NY15 2570 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 FAM74A7A6NL05 159 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 TSPAN4O14817 238 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 ST8SIA5O15466 376 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 PROP1O75360 226 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 SNAPINO95295 136 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 OR8U8P0C7N1 319 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 ZNF134P52741 427 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 ZNF137PP52743 207 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 UBE2KP61086 200 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 ZNF616Q08AN1 781 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 ZNF816Q0VGE8 651 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-217ENST00000611848 FOXL1Q12952 345 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 PEA15Q15121 130 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 LY6EQ16553 131 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 FAM74A3Q4VXF1 159 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 CT45A1Q5HYN5 189 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 DPPA3Q6W0C5 159 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 CT45A3Q8NHU0 189 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 FAM213BQ8TBF2 198 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 CD300LFQ8TDQ1 290 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 TCTEX1D2Q8WW35 142 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 ABHD14AQ9BUJ0 271 aa7.07□□□□□ -1.28
SMAD4-217ENST00000611848 PARD6GQ9BYG4 376 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-217ENST00000611848 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-217ENST00000611848 LINC00473A8K010 186 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 H3BP45 60 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 SLC31A2O15432 143 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 RBFOX2O43251 390 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMAD4-217ENST00000611848 KRASP01116 189 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 IFNA5P01569 189 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 IAPPP10997 89 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 DUTP33316 252 aaKnown RBP7.06□□□□□ -1.28
SMAD4-217ENST00000611848 G6PCP35575 357 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 COMPP49747 757 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-217ENST00000611848 RAB13P51153 203 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 ARL16Q0P5N6 197 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 TMEM267Q0VDI3 215 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-217ENST00000611848 GUK1Q16774 197 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 AARDQ4LEZ3 155 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms