RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 EIF4EBP1Q13541 118 aaPredicted RBP7.34□□□□□ -1.23
TRIM28-210ENST00000597618 TMEM41BQ5BJD5 291 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 THOC7Q6I9Y2 204 aaKnown RBP7.34□□□□□ -1.23
TRIM28-210ENST00000597618 ZNF66Q6ZN08 573 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 PQLC1Q8N2U9 271 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 MAPKAPK5-AS1Q8N8E1 139 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 TMEM116Q8NCL8 245 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 OR10R2Q8NGX6 335 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 CYGBQ8WWM9 190 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 CHRDL1Q9BU40 450 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 QTRT1Q9BXR0 403 aaKnown RBP7.34□□□□□ -1.23
TRIM28-210ENST00000597618 COMMD5Q9GZQ3 224 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 C21orf62Q9NYP8 219 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 TAS2R8Q9NYW2 309 aa7.34□□□□□ -1.23
TRIM28-210ENST00000597618 AK6Q9Y3D8 172 aaKnown RBP7.34□□□□□ -1.23
TRIM28-210ENST00000597618 IGKV1D-8A0A087WSZ0 117 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 DEFB131BA0A096LNP1 70 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 IGKV1D-13A0A0B4J2D9 117 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 ARL6IP5O75915 188 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 DFFBO76075 338 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 CD5P06127 495 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 FGF2P09038 288 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 IGKV1-13P0DP09 117 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 NFYAP23511 347 aaPredicted RBP7.33□□□□□ -1.24
TRIM28-210ENST00000597618 DTYMKP23919 212 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 RELQ04864 619 aaPredicted RBP7.33□□□□□ -1.24
TRIM28-210ENST00000597618 PLA2G7Q13093 441 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 HSD17B13Q7Z5P4 300 aaPredicted RBP7.33□□□□□ -1.24
TRIM28-210ENST00000597618 STHQ8IWL8 128 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 MFSD4AQ8N468 514 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 GBGT1Q8N5D6 347 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 UBAC2Q8NBM4 344 aa7.33□□□□□ -1.24
TRIM28-210ENST00000597618 DMBT1Q9UGM3 2413 aaPredicted RBP7.32□□□□□ -1.24
TRIM28-210ENST00000597618 DNAH5Q8TE73 4624 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 ZNF705EA8MWA4 302 aaPredicted RBP7.32□□□□□ -1.24
TRIM28-210ENST00000597618 F8W735 103 aaPredicted RBP7.32□□□□□ -1.24
TRIM28-210ENST00000597618 IFNA10P01566 189 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 SERPINE2P07093 398 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 OR13C7P0DN81 318 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 TAS2R31P59538 309 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 Q56UQ5 140 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 FAM90A2PQ658T7 463 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 LEMD1Q68G75 181 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 SLC25A24Q6NUK1 477 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 Q6ZR54 194 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 SCARB1Q8WTV0 552 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 UFD1Q92890 307 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 TMEM203Q969S6 136 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 OR10C1Q96KK4 312 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 S100A14Q9HCY8 104 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 PLCXD1Q9NUJ7 323 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 V9GY05 133 aa7.32□□□□□ -1.24
TRIM28-210ENST00000597618 ELOA3CA0A087WX78 387 aaPredicted RBP7.31□□□□□ -1.24
TRIM28-210ENST00000597618 IGHV3-49A0A0A0MS15 119 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 TRAV14DV4A0A0A6YYC5 116 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 IGHV3-21A0A0B4J1V1 117 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 C16orf90A8MZG2 172 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 UPK2O00526 184 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 NUPL2O15504 423 aaKnown RBP7.31□□□□□ -1.24
TRIM28-210ENST00000597618 RBFOX2O43251 390 aaKnown RBP eCLIP7.31□□□□□ -1.24
TRIM28-210ENST00000597618 YIF1AO95070 293 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 IFNA21P01568 189 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 IFNA17P01571 189 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 GIG44P09565 113 aaPredicted RBP7.31□□□□□ -1.24
TRIM28-210ENST00000597618 TRAPPC2P0DI81 140 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 TRAPPC2BP0DI82 140 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 SPP1P10451 314 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 NQO2P16083 231 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 CALRP27797 417 aaKnown RBP7.31□□□□□ -1.24
TRIM28-210ENST00000597618 DEFB131AP59861 70 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 ARL6IP1Q15041 203 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 SPHARQ15513 63 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 POU2AF1Q16633 256 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 HES5Q5TA89 166 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 MORN3Q6PF18 240 aaPredicted RBP7.31□□□□□ -1.24
TRIM28-210ENST00000597618 TMEM91Q6ZNR0 172 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 TCF24Q7RTU0 167 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 UBE2DNLQ8IWF7 75 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 SPAG16Q8N0X2 631 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 BPIFB6Q8NFQ5 453 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 OR10W1Q8NGF6 305 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 DGCR14Q96DF8 476 aaKnown RBP7.31□□□□□ -1.24
TRIM28-210ENST00000597618 FKBP14Q9NWM8 211 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 LSM2Q9Y333 95 aaKnown RBP7.31□□□□□ -1.24
TRIM28-210ENST00000597618 F11RQ9Y624 299 aaKnown RBP7.31□□□□□ -1.24
TRIM28-210ENST00000597618 X6R8D5 127 aa7.31□□□□□ -1.24
TRIM28-210ENST00000597618 IGLV2-18A0A075B6J9 118 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 TRAV2A0A0B4J234 112 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 TRAV3A0A0B4J244 114 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 METTL21EPA6NDL7 271 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 K7EIM0 57 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 DNASE2O00115 360 aaPredicted RBP7.3□□□□□ -1.24
TRIM28-210ENST00000597618 CD74P04233 296 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 EIF4EP06730 217 aaKnown RBP7.3□□□□□ -1.24
TRIM28-210ENST00000597618 CTSGP08311 255 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 RAB6AP20340 208 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 PSMA1P25786 263 aaKnown RBP7.3□□□□□ -1.24
TRIM28-210ENST00000597618 WT1-ASQ06250 92 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 TRAM1Q15629 374 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 MSMO1Q15800 293 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms