RNA–Protein interactions for RNA: ENST00000593257.1

TRMT1-223, Transcript of tRNA methyltransferase 1, human

TSL 4

Gene TRMT1, Length 408 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRMT1-223	ENST00000593257	LHFPL4	Q7Z7J7	247 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	ZNF709	Q8N972	641 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	OR2T10	Q8NGZ9	312 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	LYPD6B	Q8NI32	183 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	FAM213B	Q8TBF2	198 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	RITA1	Q96K30	269 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	USP9X	Q93008	2570 aa	Predicted RBP	13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257		A0A1W2PRD5	423 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257		A0A1W2PRF3	423 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257		A0A1W2PRM7	423 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	KRBOX1	C9JBD0	128 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	PRSS46	E5RG02	174 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	TSPAN15	O95858	294 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	OPN1MW	P04001	364 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	OPN1MW2	P0DN77	364 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	OPN1MW3	P0DN78	364 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	ZNF616	Q08AN1	781 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	BSX	Q3C1V8	233 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	LFNG	Q8NES3	379 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	NRGN	Q92686	78 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	RBMXL1	Q96E39	390 aa	Known RBP	13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	KIAA1456	Q9P272	454 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	WDR83OS	Q9Y284	106 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	FBXO7	Q9Y3I1	522 aa		13.48	□□□□□ -0.25
TRMT1-223	ENST00000593257	BTBD17	A6NE02	478 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	MB	P02144	154 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	MDK	P21741	143 aa	Predicted RBP	13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	RPL27A	P46776	148 aa	Known RBP	13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	RAB2A	P61019	212 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	SSX2	Q16385	188 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	TOR2A	Q5JU69	321 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	PPP1R27	Q86WC6	154 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	LRRC75A-AS1	Q8N1F1	130 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	NPB	Q8NG41	125 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	TMEM170A	Q8WVE7	144 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	RSG1	Q9BU20	258 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	KCNIP2	Q9NS61	270 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	FAM208B	Q5VWN6	2430 aa		13.47	□□□□□ -0.25
TRMT1-223	ENST00000593257	UBR5	O95071	2799 aa	Predicted RBP	13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	NPFF	O15130	113 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	NBR2	O15453	112 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	TSPAN9	O75954	239 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	IGKV1D-33	P01593	117 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	IGKV1-33	P01594	117 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	HBE1	P02100	147 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	RNASE2	P10153	161 aa	Known RBP	13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	BRS3	P32247	399 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	COMP	P49747	757 aa	Predicted RBP	13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	PLGLA	Q15195	96 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	TNXA	Q16473	311 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	MRGPRG-AS1	Q2M3A8	158 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	TMEM41B	Q5BJD5	291 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	C1orf159	Q96HA4	380 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	SRSF8	Q9BRL6	282 aa	Known RBP	13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	TPSG1	Q9NRR2	321 aa		13.46	□□□□□ -0.25
TRMT1-223	ENST00000593257	SMCO3	A2RU48	225 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257		B4DSR2	109 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	NDUFA3	O95167	84 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	MSMB	P08118	114 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	SNRNP70	P08621	437 aa	Known RBP	13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	ZP3	P21754	424 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	GATA3	P23771	443 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	CNTFR	P26992	372 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	RAB31	Q13636	194 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	EBI3	Q14213	229 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	MMD	Q15546	238 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	TUSC1	Q2TAM9	212 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	OR10W1	Q8NGF6	305 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	EAF1	Q96JC9	268 aa	Predicted RBP	13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	NPCDR1	Q9BY65	106 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	FBXL15	Q9H469	300 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	NPVF	Q9HCQ7	196 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	RFNG	Q9Y644	331 aa		13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	TET2	Q6N021	2002 aa	Predicted RBP	13.45	□□□□□ -0.26
TRMT1-223	ENST00000593257	LRBA	P50851	2863 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	SETX	Q7Z333	2677 aa	Known RBP	13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	TRAV20	A0A0B4J274	112 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	CGB1	A6NKQ9	187 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	H2AFB1	P0C5Y9	115 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	FAM106CP	P0CH98	169 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	COL8A1	P27658	744 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	GPX4	P36969	197 aa	Predicted RBP	13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	HES1	Q14469	280 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	C10orf55	Q5SWW7	151 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	CACNG8	Q8WXS5	425 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	MYO18B	Q8IUG5	2567 aa		13.44	□□□□□ -0.26
TRMT1-223	ENST00000593257	TRAV1-1	A0A0B4J248	108 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	OR13C7	P0DN81	318 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	SAA4	P35542	130 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	FHIT	P49789	147 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	DEFB113	Q30KQ7	82 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	TREML4	Q6UXN2	200 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	ZNF114	Q8NC26	417 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	PBDC1	Q9BVG4	233 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	C1RL	Q9NZP8	487 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	ARHGAP32	A7KAX9	2087 aa		13.43	□□□□□ -0.26
TRMT1-223	ENST00000593257	IGHV1-69D	A0A0B4J2H0	117 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	CENPVL3	A0A0U1RRI6	287 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	IGLC7	A0M8Q6	106 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms