RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 MMP24Q9Y5R2 645 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 COL6A5A8TX70 2615 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 DUXBA0A1W2PPF3 345 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 TMEM89A2RUT3 159 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 SH2D7A6NKC9 451 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 UPK2O00526 184 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 CXorf66Q5JRM2 361 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 TEX261Q6UWH6 196 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 ACOT7LQ6ZUV0 252 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 H2BFWTQ7Z2G1 175 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 SLC35E3Q7Z769 313 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 KCNRGQ8N5I3 272 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 LINC01006Q8NI28 216 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 ZNF430Q9H8G1 570 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 U3KQ87 197 aa13.49□□□□□ -0.25
RPRD1A-209ENST00000590898 CA2P00918 260 aa13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 AKR1C2P52895 323 aa13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 RPL8P62917 257 aaKnown RBP13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 PJVKQ0ZLH3 352 aa13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 ZNF345Q14585 488 aa13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 INO80EQ8NBZ0 244 aaPredicted RBP13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 LSM10Q969L4 123 aaKnown RBP13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 CLCC1Q96S66 551 aa13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 HSPB9Q9BQS6 159 aa13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 RCL1Q9Y2P8 373 aaKnown RBP13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 TET2Q6N021 2002 aaPredicted RBP13.48□□□□□ -0.25
RPRD1A-209ENST00000590898 CLPSL1A2RUU4 121 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 AP4M1O00189 453 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 ACTL6BO94805 426 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 IGF1P05019 195 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 P0C879 139 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 PET100P0DJ07 73 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 ZNF680Q8NEM1 530 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 RNASE11Q8TAA1 199 aaKnown RBP13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 MAGT1Q9H0U3 335 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 SERTAD4Q9NUC0 356 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 SNAPC5O75971 98 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 VDAC2P45880 294 aaPredicted RBP13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 OR2F1Q13607 317 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 FXYD3Q14802 87 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 ARSJQ5FYB0 599 aaPredicted RBP13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 TAF15Q92804 592 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 SPIN2AQ99865 258 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 SPIN2BQ9BPZ2 258 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 FKBP11Q9NYL4 201 aa13.47□□□□□ -0.25
RPRD1A-209ENST00000590898 A0A0D9SG52 128 aa13.46□□□□□ -0.25
RPRD1A-209ENST00000590898 CNIH1O95406 144 aa13.46□□□□□ -0.25
RPRD1A-209ENST00000590898 SSBP2P81877 361 aaPredicted RBP13.46□□□□□ -0.25
RPRD1A-209ENST00000590898 EXOSC2Q13868 293 aaKnown RBP13.46□□□□□ -0.25
RPRD1A-209ENST00000590898 THOC7Q6I9Y2 204 aaKnown RBP13.46□□□□□ -0.25
RPRD1A-209ENST00000590898 C19orf24Q9BVV8 132 aa13.46□□□□□ -0.25
RPRD1A-209ENST00000590898 CACNG5Q9UF02 275 aa13.46□□□□□ -0.25
RPRD1A-209ENST00000590898 TRAV3A0A0B4J244 114 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 LINC01548A6NM66 108 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 ST8SIA3O43173 380 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 NKX2-1P43699 371 aaPredicted RBP13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 COMPP49747 757 aaPredicted RBP13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 CRIP2P52943 208 aaPredicted RBP13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 SGMS2Q8NHU3 365 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 WNT10AQ9GZT5 417 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 PRNDQ9UKY0 176 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 RNF114Q9Y508 228 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 BCL2L11O43521 198 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 PITX3O75364 302 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 OR9G9P0C7N8 305 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 TMEM267Q0VDI3 215 aaPredicted RBP13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 SMCO1Q147U7 214 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 TNXAQ16473 311 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 OR4A16Q8NH70 328 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 ARPC1AQ92747 370 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 TMEM68Q96MH6 324 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 AQP10Q96PS8 301 aa13.45□□□□□ -0.26
RPRD1A-209ENST00000590898 SSSCA1O60232 199 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 EGR2P11161 476 aaPredicted RBP13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 C4BPBP20851 252 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 MDKP21741 143 aaPredicted RBP13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 NDPQ00604 133 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 KRTAP21-3Q3LHN1 58 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 AKIRIN2Q53H80 203 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 ZNF429Q86V71 674 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 SLC7A5P1Q8MH63 180 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 PCNPQ8WW12 178 aaKnown RBP13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 C11orf1Q9H5F2 150 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 TMEM14BQ9NUH8 114 aa13.44□□□□□ -0.26
RPRD1A-209ENST00000590898 KANTRA0A1W2PQU2 76 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 C15orf61A6NNL5 157 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 ATP6V0E1O15342 81 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 RLN2P04090 185 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 PROK1P58294 105 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 GNB1P62873 340 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 ID3Q02535 119 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 STPG2Q8N412 459 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 SRSF12Q8WXF0 261 aaKnown RBP13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 BSCL2Q96G97 398 aaPredicted RBP13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 PARP11Q9NR21 331 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 COA4Q9NYJ1 87 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 CACFD1Q9UGQ2 172 aa13.43□□□□□ -0.26
RPRD1A-209ENST00000590898 FOXA2Q9Y261 457 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms