RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 FGF7P21781 194 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 UBE2E1P51965 193 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 PRSS8Q16651 343 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 COMMD1Q8N668 190 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 NRGNQ92686 78 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 SIGLEC9Q9Y336 463 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 TBL2Q9Y4P3 447 aaKnown RBP13.28□□□□□ -0.28
NFIX-210ENST00000588228 CNTFRP26992 372 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 MAS1LP35410 378 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 ERHP84090 104 aaKnown RBP13.28□□□□□ -0.28
NFIX-210ENST00000588228 C2orf83Q53S99 150 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 ZNF787Q6DD87 383 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 WDR83OSQ9Y284 106 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 CGB1A6NKQ9 187 aa13.27□□□□□ -0.29
NFIX-210ENST00000588228 E7EUB6 86 aa13.27□□□□□ -0.29
NFIX-210ENST00000588228 SNCAP37840 140 aa13.27□□□□□ -0.29
NFIX-210ENST00000588228 OR10W1Q8NGF6 305 aa13.27□□□□□ -0.29
NFIX-210ENST00000588228 NPCDR1Q9BY65 106 aa13.27□□□□□ -0.29
NFIX-210ENST00000588228 LPAR2Q9HBW0 351 aa13.27□□□□□ -0.29
NFIX-210ENST00000588228 METTL1Q9UBP6 276 aaKnown RBP13.27□□□□□ -0.29
NFIX-210ENST00000588228 MYO18BQ8IUG5 2567 aa13.27□□□□□ -0.29
NFIX-210ENST00000588228 MPDU1O75352 247 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 ACTL6BO94805 426 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 MOSP00540 346 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 RNASE2P10153 161 aaKnown RBP13.26□□□□□ -0.29
NFIX-210ENST00000588228 PAX8Q06710 450 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 SSX2Q16385 188 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 TUSC1Q2TAM9 212 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 C10orf55Q5SWW7 151 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 PPP1R27Q86WC6 154 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 ZNF709Q8N972 641 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 LFNGQ8NES3 379 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 LINC00052Q96N35 136 aa13.26□□□□□ -0.29
NFIX-210ENST00000588228 SMCO3A2RU48 225 aa13.25□□□□□ -0.29
NFIX-210ENST00000588228 FNDC10F2Z333 226 aa13.25□□□□□ -0.29
NFIX-210ENST00000588228 C17orf112F2Z3M2 114 aa13.25□□□□□ -0.29
NFIX-210ENST00000588228 IGKV1D-33P01593 117 aa13.25□□□□□ -0.29
NFIX-210ENST00000588228 IGKV1-33P01594 117 aa13.25□□□□□ -0.29
NFIX-210ENST00000588228 H2AFB1P0C5Y9 115 aa13.25□□□□□ -0.29
NFIX-210ENST00000588228 MRPL41Q8IXM3 137 aaKnown RBP13.25□□□□□ -0.29
NFIX-210ENST00000588228 BPIFCQ8NFQ6 507 aa13.25□□□□□ -0.29
NFIX-210ENST00000588228 RPRMQ9NS64 109 aa13.25□□□□□ -0.29
NFIX-210ENST00000588228 A0A1B0GW64 132 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 BTBD17A6NE02 478 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 AGPAT2O15120 278 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 PLA2G2AP14555 144 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 SLC25A16P16260 332 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 RPL27AP46776 148 aaKnown RBP13.24□□□□□ -0.29
NFIX-210ENST00000588228 COMPP49747 757 aaPredicted RBP13.24□□□□□ -0.29
NFIX-210ENST00000588228 WT1-ASQ06250 92 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 TNXAQ16473 311 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 TMEM41BQ5BJD5 291 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 TREML4Q6UXN2 200 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 DYNAPQ8N1N2 210 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 MALSU1Q96EH3 234 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 NPVFQ9HCQ7 196 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 TET2Q6N021 2002 aaPredicted RBP13.24□□□□□ -0.29
NFIX-210ENST00000588228 SPTAN1Q13813 2472 aaKnown RBP13.24□□□□□ -0.29
NFIX-210ENST00000588228 SOX15O60248 233 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 NDUFA3O95167 84 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 MBP02144 154 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 MMDQ15546 238 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 CLEC12BQ2HXU8 276 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 ARSJQ5FYB0 599 aaPredicted RBP13.24□□□□□ -0.29
NFIX-210ENST00000588228 NPBQ8NG41 125 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 OR2T10Q8NGZ9 312 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 EAF1Q96JC9 268 aaPredicted RBP13.24□□□□□ -0.29
NFIX-210ENST00000588228 FBXL15Q9H469 300 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 VSIRQ9H7M9 311 aa13.24□□□□□ -0.29
NFIX-210ENST00000588228 ARHGAP32A7KAX9 2087 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 J3QKU1 62 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 NBR2O15453 112 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 HBE1P02100 147 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 SNRNP70P08621 437 aaKnown RBP13.23□□□□□ -0.29
NFIX-210ENST00000588228 COL8A1P27658 744 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 SUB1P53999 127 aaKnown RBP eCLIP13.23□□□□□ -0.29
NFIX-210ENST00000588228 ELLP55199 621 aaPredicted RBP13.23□□□□□ -0.29
NFIX-210ENST00000588228 RAB2AP61019 212 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 SRSF3P84103 164 aaKnown RBP13.23□□□□□ -0.29
NFIX-210ENST00000588228 PLGLAQ15195 96 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 SPSB3Q6PJ21 355 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 C17orf50Q8WW18 174 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 NARS2Q96I59 477 aaKnown RBP13.23□□□□□ -0.29
NFIX-210ENST00000588228 KIAA1456Q9P272 454 aa13.23□□□□□ -0.29
NFIX-210ENST00000588228 LSM4Q9Y4Z0 139 aaKnown RBP13.23□□□□□ -0.29
NFIX-210ENST00000588228 TRAV1-1A0A0B4J248 108 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 TMEM218A2RU14 115 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 OR13C7P0DN81 318 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 PAX6P26367 422 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 AKR1C1Q04828 323 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 EBI3Q14213 229 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 HES1Q14469 280 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 HNF4GQ14541 408 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 ACSM6Q6P461 480 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 TREM1Q9NP99 234 aa13.22□□□□□ -0.29
NFIX-210ENST00000588228 CENPVL3A0A0U1RRI6 287 aa13.21□□□□□ -0.29
NFIX-210ENST00000588228 IGLC7A0M8Q6 106 aa13.21□□□□□ -0.29
NFIX-210ENST00000588228 NPFFO15130 113 aa13.21□□□□□ -0.29
NFIX-210ENST00000588228 CD5P06127 495 aa13.21□□□□□ -0.29
NFIX-210ENST00000588228 MSMBP08118 114 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms