RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 BPESC1Q9GZL8 116 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 ZNRD1Q9P1U0 126 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 MINOS1-NBL1R4GNA1 71 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 NBEAL1Q6ZS30 2694 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 TRAV3A0A0B4J244 114 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 IGHV1-3A0A0C4DH29 117 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 A0A1W2PN81 502 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 ANKRD34BA5PLL1 514 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 SRRM4A7MD48 611 aaKnown RBP8.39□□□□□ -1.07
LIG3-203ENST00000585370 H3BP45 60 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 IFNA10P01566 189 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 SAA1P0DJI8 122 aaPredicted RBP8.39□□□□□ -1.07
LIG3-203ENST00000585370 COX7A1P24310 79 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 ATP6V0CP27449 155 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 CD1BP29016 333 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 CHRNA7P36544 502 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 REG1BP48304 166 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 HOXA1P49639 335 aaPredicted RBP8.39□□□□□ -1.07
LIG3-203ENST00000585370 F2RL1P55085 397 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 OR2B8PP59922 312 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 RPL8P62917 257 aaKnown RBP8.39□□□□□ -1.07
LIG3-203ENST00000585370 PRCDQ00LT1 54 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 PAX2Q02962 417 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 AANATQ16613 207 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 TPTE2P1Q5T6R2 138 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 MOB3BQ86TA1 216 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 HSD17B11Q8NBQ5 300 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 C10orf105Q8TEF2 133 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 PCNPQ8WW12 178 aaKnown RBP8.39□□□□□ -1.07
LIG3-203ENST00000585370 CXorf58Q96LI9 332 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 OR4C12Q96R67 309 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 COMMD5Q9GZQ3 224 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 NARFLQ9H6Q4 476 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 UQCC1Q9NVA1 299 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 TIMM9Q9Y5J7 89 aa8.39□□□□□ -1.07
LIG3-203ENST00000585370 TEX50A0A1B0GTY4 177 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 C15orf62A8K5M9 175 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 PMS2P5A8MQ11 134 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 ODF3BA8MYP8 253 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 VWC2LB2RUY7 222 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 FNDC10F2Z333 226 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 CD5LO43866 347 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 MPDU1O75352 247 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 TSPAN9O75954 239 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 PRH1P02810 166 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 ZFP36P26651 326 aaKnown RBP8.38□□□□□ -1.07
LIG3-203ENST00000585370 LGALS4P56470 323 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 ERHP84090 104 aaKnown RBP8.38□□□□□ -1.07
LIG3-203ENST00000585370 ARL16Q0P5N6 197 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 VWC2Q2TAL6 325 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 AKR1C8PQ5T2L2 129 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 CENPVQ7Z7K6 275 aaPredicted RBP8.38□□□□□ -1.07
LIG3-203ENST00000585370 HAPLN4Q86UW8 402 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 MMD2Q8IY49 270 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 LYPD6BQ8NI32 183 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 ZDHHC16Q969W1 377 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 WDR61Q9GZS3 305 aaKnown RBP8.38□□□□□ -1.07
LIG3-203ENST00000585370 SIRPDQ9H106 197 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 PLEKHA3Q9HB20 300 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 LPAR2Q9HBW0 351 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 MMP26Q9NRE1 261 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 YAE1D1Q9NRH1 226 aa8.38□□□□□ -1.07
LIG3-203ENST00000585370 TBL2Q9Y4P3 447 aaKnown RBP8.38□□□□□ -1.07
LIG3-203ENST00000585370 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.38□□□□□ -1.077e-16■■■■■ 75.7
LIG3-203ENST00000585370 IGHV4-30-2A0A087WSY4 118 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 A0A096LNT2 108 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 BTBD17A6NE02 478 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 KRBOX1C9JBD0 128 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 TOX4O94842 621 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 IGLV2-23P01705 113 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 MBP02144 154 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 CAMLGP49069 296 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 UBE2E1P51965 193 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 SUB1P53999 127 aaKnown RBP eCLIP8.37□□□□□ -1.07
LIG3-203ENST00000585370 DVL1P1P54792 670 aaPredicted RBP8.37□□□□□ -1.07
LIG3-203ENST00000585370 RAB2AP61019 212 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 DLK1P80370 383 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 PJVKQ0ZLH3 352 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 DIAPH2-AS1Q14236 149 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 HABP2Q14520 560 aaPredicted RBP8.37□□□□□ -1.07
LIG3-203ENST00000585370 PXDC1Q5TGL8 231 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 OR8G2PQ6IF36 304 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 BTNL8Q6UX41 500 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 ETV3LQ6ZN32 361 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 VMO1Q7Z5L0 202 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 THNSL2Q86YJ6 484 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 LFNGQ8NES3 379 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 TAF15Q92804 592 aaKnown RBP eCLIP8.37□□□□□ -1.07
LIG3-203ENST00000585370 NDUFA4L2Q9NRX3 87 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 FBXO7Q9Y3I1 522 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 ANK2Q01484 3957 aa8.37□□□□□ -1.07
LIG3-203ENST00000585370 C17orf112F2Z3M2 114 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 I3L521 148 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 TSPAN15O95858 294 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 IFNA4P05014 189 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 CRYGBP07316 175 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 SLC25A16P16260 332 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 NPY1RP25929 384 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 SNCAP37840 140 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 COMPP49747 757 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms