RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ZFP41Q8N8Y5 198 aa7.97□□□□□ -1.13
CASC3-208ENST00000583649 GDPD1Q8N9F7 314 aa7.97□□□□□ -1.13
CASC3-208ENST00000583649 C15orf53Q8NAA6 179 aa7.97□□□□□ -1.13
CASC3-208ENST00000583649 C5orf30Q96GV9 206 aa7.97□□□□□ -1.13
CASC3-208ENST00000583649 QTRT1Q9BXR0 403 aaKnown RBP7.97□□□□□ -1.13
CASC3-208ENST00000583649 MS4A6AQ9H2W1 248 aa7.97□□□□□ -1.13
CASC3-208ENST00000583649 PLGRKTQ9HBL7 147 aa7.97□□□□□ -1.13
CASC3-208ENST00000583649 BET1LQ9NYM9 111 aa7.97□□□□□ -1.13
CASC3-208ENST00000583649 RABAC1Q9UI14 185 aa7.97□□□□□ -1.13
CASC3-208ENST00000583649 DIMT1Q9UNQ2 313 aaKnown RBP7.97□□□□□ -1.13
CASC3-208ENST00000583649 NBDYA0A0U1RRE5 68 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 EI24O14681 340 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 FCGR3AP08637 254 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 GADD45AP24522 165 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 OR2B8PP59922 312 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 C1orf146Q5VVC0 180 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 FAM90A2PQ658T7 463 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 H1FOOQ8IZA3 346 aaPredicted RBP7.96□□□□□ -1.14
CASC3-208ENST00000583649 MS4A15Q8N5U1 240 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 TMEM80Q96HE8 168 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 OR10C1Q96KK4 312 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 SPATA2Q9UM82 520 aa7.96□□□□□ -1.14
CASC3-208ENST00000583649 RBMX2Q9Y388 322 aaKnown RBP7.96□□□□□ -1.14
CASC3-208ENST00000583649 IGHV3-49A0A0A0MS15 119 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 A0A0A6YYD4 124 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 LOC100130705A0A1B0GUX0 176 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 A0A1W2PS18 150 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 SMIM9A6NGZ8 99 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 LALBAP00709 142 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 SERPINE2P07093 398 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 FGF2P09038 288 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 OR13C7P0DN81 318 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 EIF2B2P49770 351 aaKnown RBP7.95□□□□□ -1.14
CASC3-208ENST00000583649 QRFPP83859 136 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 RCN1Q15293 331 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 UBE2UQ5VVX9 321 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 SCARB1Q8WTV0 552 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 SLC7A6OSQ96CW6 309 aaPredicted RBP7.95□□□□□ -1.14
CASC3-208ENST00000583649 RAB3CQ96E17 227 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 GRAMD2BQ96HH9 432 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 NARS2Q96I59 477 aaKnown RBP7.95□□□□□ -1.14
CASC3-208ENST00000583649 NIPSNAP3BQ9BS92 247 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 CLEC5AQ9NY25 188 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 OR2W1Q9Y3N9 320 aa7.95□□□□□ -1.14
CASC3-208ENST00000583649 IGLC7A0M8Q6 106 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 J3QRK9 145 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 MYL12BO14950 172 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 TRAPPC2P0DI81 140 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 TRAPPC2BP0DI82 140 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 HTN3P15516 51 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 FGF9P31371 208 aaPredicted RBP7.94□□□□□ -1.14
CASC3-208ENST00000583649 EMP1P54849 157 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 TMEM50BP56557 158 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 ST3GAL4Q11206 333 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 ACSM3Q53FZ2 586 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 HSD17B12Q53GQ0 312 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 ACTL10Q5JWF8 245 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 TXN2Q99757 166 aa7.94□□□□□ -1.14
CASC3-208ENST00000583649 YTHDF1Q9BYJ9 559 aaKnown RBP7.94□□□□□ -1.14
CASC3-208ENST00000583649 LRP1BQ9NZR2 4599 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 DENRO43583 198 aaKnown RBP7.93□□□□□ -1.14
CASC3-208ENST00000583649 CTSGP08311 255 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 GIG44P09565 113 aaPredicted RBP7.93□□□□□ -1.14
CASC3-208ENST00000583649 C4BPBP20851 252 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 MFAP4P55083 255 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 CCL18P55774 89 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 TAS2R31P59538 309 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 ARPC4P59998 168 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 ARL6IP1Q15041 203 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 RAB11BQ15907 218 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 TIMM50Q3ZCQ8 353 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 KCTD21Q4G0X4 260 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 GSG1LQ6UXU4 331 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 MFSD4AQ8N468 514 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 ZNF555Q8NEP9 628 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 DMBX1Q8NFW5 382 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 ZNF414Q96IQ9 312 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 SCRT1Q9BWW7 348 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 KCNK15Q9H427 330 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 ZNF446Q9NWS9 450 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 CLEC2DQ9UHP7 191 aa7.93□□□□□ -1.14
CASC3-208ENST00000583649 PUS1Q9Y606 427 aaKnown RBP eCLIP7.93□□□□□ -1.14
CASC3-208ENST00000583649 F11RQ9Y624 299 aaKnown RBP7.93□□□□□ -1.14
CASC3-208ENST00000583649 IGHV3OR16-13A0A075B7E8 117 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 IGHV3-21A0A0B4J1V1 117 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 IGHV3-74A0A0B4J1X5 117 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 EFCAB10A6NFE3 127 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 FOXI3A8MTJ6 420 aaPredicted RBP7.92□□□□□ -1.14
CASC3-208ENST00000583649 GNG7O60262 68 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 HLA-DQB1P01920 261 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 NQO2P16083 231 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 GNRHRP30968 328 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 RASSF2P50749 326 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 RPL30P62888 115 aaKnown RBP7.92□□□□□ -1.14
CASC3-208ENST00000583649 CATR1Q13166 79 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 OXA1LQ15070 435 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 TTC32Q5I0X7 151 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 PLAC9Q5JTB6 97 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 Q5VSD8 79 aa7.92□□□□□ -1.14
CASC3-208ENST00000583649 ZNF773Q6PK81 442 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms