RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 MAGT1Q9H0U3 335 aa8.51□□□□□ -1.05
SS18-213ENST00000579640 HIPK2Q9H2X6 1198 aa8.51□□□□□ -1.05
SS18-213ENST00000579640 RCL1Q9Y2P8 373 aaKnown RBP8.51□□□□□ -1.05
SS18-213ENST00000579640 TET2Q6N021 2002 aaPredicted RBP8.5□□□□□ -1.05
SS18-213ENST00000579640 E5RGE8 158 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 SSSCA1O60232 199 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 IGHG2P01859 326 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 OPN1MWP04001 364 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 RNASE1P07998 156 aaKnown RBP8.5□□□□□ -1.05
SS18-213ENST00000579640 OPN1MW2P0DN77 364 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 OPN1MW3P0DN78 364 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 SLC25A4P12235 298 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 LYL1P12980 280 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 ERHP84090 104 aaKnown RBP8.5□□□□□ -1.05
SS18-213ENST00000579640 C10orf55Q5SWW7 151 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 C11orf87Q6NUJ2 197 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 SMIM8Q96KF7 97 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 TMEM68Q96MH6 324 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 WSB1Q9Y6I7 421 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 MTORP42345 2549 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 TRAV14DV4A0A0A6YYC5 116 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 CGB1A6NKQ9 187 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 TRIM77I1YAP6 450 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 C1QBP02746 253 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 VDAC2P45880 294 aaPredicted RBP8.5□□□□□ -1.05
SS18-213ENST00000579640 ATP5IP56385 69 aaPredicted RBP8.5□□□□□ -1.05
SS18-213ENST00000579640 RPL23AP62750 156 aaKnown RBP8.5□□□□□ -1.05
SS18-213ENST00000579640 RPP30P78346 268 aaKnown RBP8.5□□□□□ -1.05
SS18-213ENST00000579640 GRPEL2Q8TAA5 225 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 ABHD5Q8WTS1 349 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 HSPB9Q9BQS6 159 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 RNF126Q9BV68 326 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 PRSS22Q9GZN4 317 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 C11orf1Q9H5F2 150 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 ESM1Q9NQ30 184 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 HEYLQ9NQ87 328 aaPredicted RBP8.5□□□□□ -1.05
SS18-213ENST00000579640 MBD2Q9UBB5 411 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 ZNF580Q9UK33 172 aa8.5□□□□□ -1.05
SS18-213ENST00000579640 MSGN1A6NI15 193 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 TEX22C9J3V5 150 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 E7EUB6 86 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 G3V3Q6 166 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 H0YIZ8 118 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 TCF21O43680 179 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 TSC22D2O75157 780 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 IAPPP10997 89 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 P2RY1P47900 373 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 CRIP2P52943 208 aaPredicted RBP8.49□□□□□ -1.05
SS18-213ENST00000579640 BLCAPP62952 87 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 NDPQ00604 133 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 TMEM267Q0VDI3 215 aaPredicted RBP8.49□□□□□ -1.05
SS18-213ENST00000579640 Q5BKY6 102 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 SPINK9Q5DT21 86 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 C9orf152Q5JTZ5 239 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 SLC35E3Q7Z769 313 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 SGMS2Q8NHU3 365 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 PPP1R14BQ96C90 147 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 DUX5Q96PT3 197 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 PARP11Q9NR21 331 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 U3KQ87 197 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 MXRA5Q9NR99 2828 aa8.49□□□□□ -1.05
SS18-213ENST00000579640 NSD1Q96L73 2696 aaPredicted RBP8.48□□□□□ -1.05
SS18-213ENST00000579640 A0A1B0GW64 132 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 IGLC7A0M8Q6 106 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 SH2D7A6NKC9 451 aaPredicted RBP8.48□□□□□ -1.05
SS18-213ENST00000579640 SMLR1H3BR10 107 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 IGF1P05019 195 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 UBA52P62987 128 aaKnown RBP8.48□□□□□ -1.05
SS18-213ENST00000579640 CD300CQ08708 224 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 ZFP69Q49AA0 526 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 TMEM65Q6PI78 240 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 NOXA1Q86UR1 476 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 OR2C3Q8N628 320 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 HYLS1Q96M11 299 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 PSENENQ9NZ42 101 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 OR5AC2Q9NZP5 309 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 PLXNB1O43157 2135 aa8.48□□□□□ -1.05
SS18-213ENST00000579640 TEP1Q99973 2627 aaKnown RBP8.48□□□□□ -1.05
SS18-213ENST00000579640 FXYD6-FXYD2A0A087WZ82 144 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 HMSDA8MTL9 139 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 AP4M1O00189 453 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 ATP6V0E1O15342 81 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 SCAF4O95104 1147 aaKnown RBP8.47□□□□□ -1.05
SS18-213ENST00000579640 CRYBA1P05813 215 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 OR13C7P0DN81 318 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 EGR2P11161 476 aaPredicted RBP8.47□□□□□ -1.05
SS18-213ENST00000579640 NUP62P37198 522 aaPredicted RBP8.47□□□□□ -1.05
SS18-213ENST00000579640 SNCAP37840 140 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 HTR2BP41595 481 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 SUB1P53999 127 aaKnown RBP eCLIP8.47□□□□□ -1.05
SS18-213ENST00000579640 PAX9P55771 341 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 WT1-ASQ06250 92 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 AKIRIN2Q53H80 203 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 ZNF114Q8NC26 417 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 SLC24A4Q8NFF2 622 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 OR10W1Q8NGF6 305 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 DCUN1D4Q92564 292 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 FAM103A1Q9BTL3 118 aaKnown RBP8.47□□□□□ -1.05
SS18-213ENST00000579640 LYRM2Q9NU23 88 aaPredicted RBP8.47□□□□□ -1.05
SS18-213ENST00000579640 STRAPQ9Y3F4 350 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms