RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MARCH11A6NNE9 402 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 OR2C1O95371 312 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 EIF4EP06730 217 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 FGF2P09038 288 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 RPA2P15927 270 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 NAT1P18440 290 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 HRH1P35367 487 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 OR6F1Q8NGZ6 308 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 MUC7Q8TAX7 377 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 CXorf58Q96LI9 332 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 THAP7Q9BT49 309 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 FUNDC2Q9BWH2 189 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 QTRT1Q9BXR0 403 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 FXYD6Q9H0Q3 95 aa9.37□□□□□ -0.91
CTDNEP1-205ENST00000570828 IGLV11-55A0A075B6I3 123 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 TRBV7-1A0A0A6YYK4 115 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 IGLC7A0M8Q6 106 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 C2orf70A6NJV1 201 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 CGB1A6NKQ9 187 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 LGALS9O00182 355 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 CYB5BO43169 146 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 PGLYRP1O75594 196 aaPredicted RBP9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 APOA1P02647 267 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 FOLR2P14207 255 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 F2RP25116 425 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 HLA-DMAP28067 261 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 S100GP29377 79 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 CD81P60033 236 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 VBP1P61758 197 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 KLK9Q2XQG4 91 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 FAM106AQ4KMX7 169 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 THOC7Q6I9Y2 204 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 HSD17B13Q7Z5P4 300 aaPredicted RBP9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 GPHB5Q86YW7 130 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 SNX29P2Q8IUI4 249 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 LAX1Q8IWV1 398 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 SPATA25Q9BR10 227 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 SCPEP1Q9HB40 452 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 SLC2A8Q9NY64 477 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 TECRQ9NZ01 308 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 THYN1Q9P016 225 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 KLK9Q9UKQ9 250 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 DMRT1Q9Y5R6 373 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 RYR3Q15413 4870 aa9.36□□□□□ -0.91
CTDNEP1-205ENST00000570828 ZNF320A2RRD8 509 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 MFSD2BA6NFX1 497 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 GPR31O00270 319 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 TPPPO94811 219 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 RCVRNP35243 200 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 MECP2P51608 486 aaKnown RBP9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 TSPAN5P62079 268 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 GUCA2BQ16661 112 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 GPX8Q8TED1 209 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 DGCR14Q96DF8 476 aaKnown RBP9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 CMTM3Q96MX0 182 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 PALMDQ9NP74 551 aa9.35□□□□□ -0.91
CTDNEP1-205ENST00000570828 DNAH7Q8WXX0 4024 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 A8MWP6 167 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 SNAPC5O75971 98 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 KRASP01116 189 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 TRAPPC2P0DI81 140 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 TRAPPC2BP0DI82 140 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 GPR183P32249 361 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 LPAR6P43657 344 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 RORCP51449 518 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 HAGHQ16775 308 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 DEFB114Q30KQ6 69 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 PHLDA2Q53GA4 152 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 LPCAT3Q6P1A2 487 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 GDPD1Q8N9F7 314 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 OR1L8Q8NGR8 309 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 FCAMRQ8WWV6 532 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 CACNG8Q8WXS5 425 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 AP3S1Q92572 193 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 LSM10Q969L4 123 aaKnown RBP9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 ISOC1Q96CN7 298 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 NEURL2Q9BR09 285 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 HINT2Q9BX68 163 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 PLEKHA3Q9HB20 300 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 ZC4H2Q9NQZ6 224 aa9.34□□□□□ -0.91
CTDNEP1-205ENST00000570828 TMEM213A2RRL7 107 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 FAM25AB3EWG3 89 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 FAM25CB3EWG5 89 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 FAM25GB3EWG6 89 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 HPGDSO60760 199 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 CLEC3BP05452 202 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR13C7P0DN81 318 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 LYL1P12980 280 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 ELK1P19419 428 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 EDN2P20800 178 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 CBLN1P23435 193 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 G6PCP35575 357 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 CASC10Q5T4H9 136 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 LYSMD2Q8IV50 215 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 OR10W1Q8NGF6 305 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 ZNF502Q8TBZ5 544 aa9.33□□□□□ -0.92
CTDNEP1-205ENST00000570828 PRNDQ9UKY0 176 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms