RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SMPD3Q9NY59 655 aaPredicted RBP7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 RBMX2Q9Y388 322 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 VPS13BQ7Z7G8 4022 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 SRRM2Q9UQ35 2752 aaKnown RBP7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 SPP1P10451 314 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 TAS2R43P59537 309 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 PAFAH1B2P68402 229 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 ACSM3Q53FZ2 586 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 SLC25A24Q6NUK1 477 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 ZFP1Q6P2D0 407 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 C6orf223Q8N319 242 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 CBR4Q8N4T8 237 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 OR10W1Q8NGF6 305 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 PHYHIPQ92561 330 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 OR10C1Q96KK4 312 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 FAM210BQ96KR6 192 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 ATP6V0BQ99437 205 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 MS4A6AQ9H2W1 248 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 S100A14Q9HCY8 104 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 BET1LQ9NYM9 111 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 C21orf62Q9NYP8 219 aa7.43□□□□□ -1.22
CTDNEP1-202ENST00000570380 IGKV1D-8A0A087WSZ0 117 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 TRAV3A0A0B4J244 114 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 IRGMA1A4Y4 181 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 DNASE2O00115 360 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 NUPL2O15504 423 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 HRASP01112 189 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 CTSGP08311 255 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 PLA2G7Q13093 441 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 EIF4EBP1Q13541 118 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 TIMM50Q3ZCQ8 353 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 LILRB2Q8N423 598 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 GDPD1Q8N9F7 314 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 UBAC2Q8NBM4 344 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 DGCR14Q96DF8 476 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 TMEM80Q96HE8 168 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 GPHA2Q96T91 129 aa7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 SRSF8Q9BRL6 282 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-202ENST00000570380 TRAV14DV4A0A0A6YYC5 116 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 IGKV1D-13A0A0B4J2D9 117 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 KNCNA6PVL3 124 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 YIF1AO95070 293 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 HLA-DQB1P01920 261 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 SERPINE2P07093 398 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 IGKV1-13P0DP09 117 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 CD36P16671 472 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 MRPS15P82914 257 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 WT1-ASQ06250 92 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 SSX1Q16384 188 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 Q56UQ5 140 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 PQLC1Q8N2U9 271 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 MFSD4AQ8N468 514 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 OR56B1Q8NGI3 324 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 TCTEX1D2Q8WW35 142 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 ST8SIA2Q92186 375 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 GFI1Q99684 422 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 HSD17B10Q99714 261 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 HRASLSQ9HDD0 168 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 SPATA2Q9UM82 520 aa7.41□□□□□ -1.22
CTDNEP1-202ENST00000570380 TRAV2A0A0B4J234 112 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 NBDYA0A0U1RRE5 68 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 K7EIM0 57 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 SLC17A2O00624 439 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 CYB5BO43169 146 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 ST8SIA3O43173 380 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 APOHP02749 345 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 CD5P06127 495 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 OR13C7P0DN81 318 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 NFYAP23511 347 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 Q6ZS49 121 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 RAB3CQ96E17 227 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 YTHDF1Q9BYJ9 559 aaKnown RBP7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 COMMD5Q9GZQ3 224 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 RNF167Q9H6Y7 350 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 VSIRQ9H7M9 311 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 TAS2R8Q9NYW2 309 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 OR2W1Q9Y3N9 320 aa7.4□□□□□ -1.22
CTDNEP1-202ENST00000570380 IGHV3-66A0A0C4DH42 116 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 EFCAB10A6NFE3 127 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 ERICH4A6NGS2 130 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 UPK2O00526 184 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 SLC22A5O76082 557 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 SPART-AS1P0CW21 52 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 GNB3P16520 340 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 CLDN12P56749 244 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 FAM3BP58499 235 aaPredicted RBP7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 RPL11P62913 178 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 RELQ04864 619 aaPredicted RBP7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 ST3GAL4Q11206 333 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 HSD17B12Q53GQ0 312 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 UBE2UQ5VVX9 321 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 ZNF66Q6ZN08 573 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 DUSP18Q8NEJ0 188 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 C18orf15Q96N68 181 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 QTRT1Q9BXR0 403 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 PLGRKTQ9HBL7 147 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 RABAC1Q9UI14 185 aa7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 F11RQ9Y624 299 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-202ENST00000570380 A0A075B6Q4 140 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms