RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ID3Q02535 119 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 C4orf46Q504U0 113 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 HSP90B2PQ58FF3 399 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 ZNF66Q6ZN08 573 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 KCTD9Q7L273 389 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 TCF24Q7RTU0 167 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 LRRTM1Q86UE6 522 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 H1FOOQ8IZA3 346 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 OR10J5Q8NHC4 309 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 DGCR14Q96DF8 476 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 CENPNQ96H22 339 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 DCUN1D5Q9BTE7 237 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 YTHDF1Q9BYJ9 559 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 RNF167Q9H6Y7 350 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 SMPD3Q9NY59 655 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 CLEC2DQ9UHP7 191 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 KCNK7Q9Y2U2 307 aa5.45□□□□□ -1.54
HERPUD1-206ENST00000563343 IGHV3OR16-13A0A075B7E8 117 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 IGHV3-74A0A0B4J1X5 117 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 TRAV2A0A0B4J234 112 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 K7EIM0 57 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 NUPL2O15504 423 aaKnown RBP5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 APOHP02749 345 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 CDK1P06493 297 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 FCGR3AP08637 254 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 HLA-GP17693 338 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 RAB6AP20340 208 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 INSL4Q14641 139 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 SMN1Q16637 294 aaKnown RBP5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 TMPRSS11AQ6ZMR5 421 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 OR10W1Q8NGF6 305 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 SCARB1Q8WTV0 552 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 SLC7A6OSQ96CW6 309 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 Q96MT0 163 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 MS4A6AQ9H2W1 248 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 VSIRQ9H7M9 311 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 BET1LQ9NYM9 111 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 C21orf62Q9NYP8 219 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 THYN1Q9P016 225 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 AP4S1Q9Y587 144 aa5.44□□□□□ -1.54
HERPUD1-206ENST00000563343 IGKV1D-8A0A087WSZ0 117 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 IGHV3-21A0A0B4J1V1 117 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 TRAV3A0A0B4J244 114 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 PNMA8CA0A1B0GUJ8 204 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 KNCNA6PVL3 124 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 K7EQG2 157 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 RAB27BO00194 218 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 EI24O14681 340 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 WBP4O75554 376 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 CD1AP06126 327 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 FCGR1AP12314 374 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 CRHBPP24387 322 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 DCKP27707 260 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 PAFAH1B2P68402 229 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 WT1-ASQ06250 92 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 TIMM50Q3ZCQ8 353 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 TTC23Q5W5X9 447 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 TMEM88Q6PEY1 159 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 GDPD1Q8N9F7 314 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 OR4S2Q8NH73 311 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 ST8SIA2Q92186 375 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 FRZBQ92765 325 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 CMTM3Q96MX0 182 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 SRSF8Q9BRL6 282 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 KRTAP1-5Q9BYS1 174 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 MDFICQ9P1T7 246 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 DKK2Q9UBU2 259 aa5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 MRPS7Q9Y2R9 242 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 RBMX2Q9Y388 322 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 RBM7Q9Y580 266 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-206ENST00000563343 TRAV14DV4A0A0A6YYC5 116 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 IGKV1D-13A0A0B4J2D9 117 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 ZNF705FA8MVS1 300 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 HLA-DQB1P01920 261 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 SERPINE2P07093 398 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 ZNF705DP0CH99 300 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 ZNF705BP0CI00 300 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 SPART-AS1P0CW21 52 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 IGKV1-13P0DP09 117 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 BTF3P20290 206 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 TAS2R43P59537 309 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 SSX1Q16384 188 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 DNAL1Q4LDG9 190 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 UBE2UQ5VVX9 321 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 ZNF705AQ6ZN79 300 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 Q6ZS49 121 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 MAFIPQ8WZ33 124 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 GRAMD2BQ96HH9 432 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 GPHA2Q96T91 129 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 NEU1Q99519 415 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 GFI1Q99684 422 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 URM1Q9BTM9 101 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 DIMT1Q9UNQ2 313 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 PRELID3BQ9Y3B1 194 aa5.42□□□□□ -1.54
HERPUD1-206ENST00000563343 J3QRK9 145 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 DNASE2O00115 360 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 UPK2O00526 184 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 GYG2O15488 501 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 HRASP01112 189 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 CD5P06127 495 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms