RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 C9orf64Q5T6V5 341 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 AADACL3Q5VUY0 350 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 RPL22L1Q6P5R6 122 aaKnown RBP1.21□□□□□ -2.22
GABPB1-209ENST00000559100 BRD3OSQ6XYD6 125 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 BPIFA4PQ86YQ2 179 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 GNPDA2Q8TDQ7 276 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HIST1H2BHQ93079 126 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 IMMP2LQ96T52 175 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HIST1H2BNQ99877 126 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HIST1H2BMQ99879 126 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 XAGE1AQ9HD64 81 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 GID8Q9NWU2 228 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 NDUFB11Q9NX14 153 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 IDI2-AS1Q9NZ38 188 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 SAMHD1Q9Y3Z3 626 aaKnown RBP1.21□□□□□ -2.22
GABPB1-209ENST00000559100 TIMM22Q9Y584 194 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 ADGRL3Q9HAR2 1447 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 CHD5Q8TDI0 1954 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 TRPM3Q9HCF6 1732 aaPredicted RBP1.2□□□□□ -2.22
GABPB1-209ENST00000559100 NLRC5Q86WI3 1866 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 NAV1Q8NEY1 1877 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF532Q9HCE3 1301 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 CACNA1DQ01668 2161 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 SHANK1Q9Y566 2161 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 TRAV41A0A0B4J266 112 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 IRGMA1A4Y4 181 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 FAM159BA6NKW6 160 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 FABP5P3A8MUU1 101 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF878C9JN71 531 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 HMGB3O15347 200 aaKnown RBP1.2□□□□□ -2.22
GABPB1-209ENST00000559100 IFNA10P01566 189 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 PPIBP23284 216 aaKnown RBP1.2□□□□□ -2.22
GABPB1-209ENST00000559100 CD24P25063 80 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 S100A4P26447 101 aaKnown RBP1.2□□□□□ -2.22
GABPB1-209ENST00000559100 PSMB8P28062 276 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 ERP29P30040 261 aaKnown RBP1.2□□□□□ -2.22
GABPB1-209ENST00000559100 RPL28P46779 137 aaKnown RBP1.2□□□□□ -2.22
GABPB1-209ENST00000559100 GABRA4P48169 554 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 TPI1P60174 286 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 RAB14P61106 215 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 TMEM258P61165 79 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 HIST1H4AP62805 103 aaKnown RBP1.2□□□□□ -2.22
GABPB1-209ENST00000559100 CCL20P78556 96 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 RPL18Q07020 188 aaKnown RBP1.2□□□□□ -2.22
GABPB1-209ENST00000559100 FOXF1Q12946 379 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 FAM173BQ6P4H8 233 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF283Q8N7M2 679 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 GDPD1Q8N9F7 314 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 OR52L1Q8NGH7 329 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 SLC25A40Q8TBP6 338 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 TOMM6Q96B49 74 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 C20orf166-AS1Q96NR2 134 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 TSPAN32Q96QS1 320 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 NIPSNAP1Q9BPW8 284 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 GINS4Q9BRT9 223 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 ATPIF1Q9UII2 106 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 HHLA3Q9XRX5 114 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 UTP11Q9Y3A2 253 aaKnown RBP1.2□□□□□ -2.22
GABPB1-209ENST00000559100 V9GYQ6 96 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 ADAMTSL1Q8N6G6 1762 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 NCOA1Q15788 1441 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 ABCC12Q96J65 1359 aa1.2□□□□□ -2.22
GABPB1-209ENST00000559100 LCTP09848 1927 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 ODF3BA8MYP8 253 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 CLDN25C9JDP6 229 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 J3QQQ9 107 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 NACADO15069 1562 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 PIK3C2GO75747 1445 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 IGHV3-7P01780 117 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 C8GP07360 202 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 LGALS1P09382 135 aaKnown RBP1.19□□□□□ -2.22
GABPB1-209ENST00000559100 DEFA4P12838 97 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 RPS4Y1P22090 263 aaKnown RBP1.19□□□□□ -2.22
GABPB1-209ENST00000559100 EMP1P54849 157 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 RPL26P61254 145 aaKnown RBP1.19□□□□□ -2.22
GABPB1-209ENST00000559100 RHOBP62745 196 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 KRR1Q13601 381 aaKnown RBP1.19□□□□□ -2.22
GABPB1-209ENST00000559100 POU6F1Q14863 301 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 RHEBQ15382 184 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 C12orf74Q32Q52 190 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 PABPC1L2AQ5JQF8 200 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 SPANXN3Q5MJ09 141 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 LYRM7Q5U5X0 104 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 TEX36Q5VZQ5 186 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 TRIQKQ629K1 86 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 TMEM42Q69YG0 159 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 DHRS4L2Q6PKH6 230 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 LYZL1Q6UWQ5 148 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 CLVS1Q8IUQ0 354 aaPredicted RBP1.19□□□□□ -2.22
GABPB1-209ENST00000559100 DERL1Q9BUN8 251 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 OR8D2Q9GZM6 311 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 SLC39A9Q9NUM3 307 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 ARMC1Q9NVT9 282 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 RPL26L1Q9UNX3 145 aaKnown RBP1.19□□□□□ -2.22
GABPB1-209ENST00000559100 CYSLTR1Q9Y271 337 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 RBM7Q9Y580 266 aaKnown RBP1.19□□□□□ -2.22
GABPB1-209ENST00000559100 FAM215AQ9Y5M1 114 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 RTL1A6NKG5 1358 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 NUP155O75694 1391 aa1.19□□□□□ -2.22
GABPB1-209ENST00000559100 DSCAMO60469 2012 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms