RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 IGKV1D-13A0A0B4J2D9 117 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 C15orf61A6NNL5 157 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 IGLV2-14P01704 120 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 IGKV1-13P0DP09 117 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 DTYMKP23919 212 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 ARL6IP1Q15041 203 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 TRAM1Q15629 374 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 Q56UQ5 140 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 Q6ZTC4 211 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 GBGT1Q8N5D6 347 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 GDPD1Q8N9F7 314 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 Q8NAQ8 132 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 ATP6V0BQ99437 205 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 CHRDL1Q9BU40 450 aa12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 QTRT1Q9BXR0 403 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 DYNC1H1Q14204 4646 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-204ENST00000558394 IGHV3-21A0A0B4J1V1 117 aa12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 IGHV7-4-1A0A0J9YVY3 117 aa12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 EBAG9O00559 213 aa12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 CHEK1O14757 476 aa12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 YIF1AO95070 293 aa12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 OR13C7P0DN81 318 aa12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 RELQ04864 619 aaPredicted RBP12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 THOC7Q6I9Y2 204 aaKnown RBP12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 TMEM91Q6ZNR0 172 aa12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 HSD17B13Q7Z5P4 300 aaPredicted RBP12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 STHQ8IWL8 128 aa12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 DNAH11Q96DT5 4516 aa12.96□□□□□ -0.33
TSPAN3-204ENST00000558394 IGHV3-49A0A0A0MS15 119 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 IGHV4-28A0A0C4DH34 117 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 DNASE2O00115 360 aaPredicted RBP12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 EIF4EP06730 217 aaKnown RBP12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 HSMCR30P0CW71 290 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 MIFP14174 115 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 RAB6AP20340 208 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 PSMA1P25786 263 aaKnown RBP12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 BRWD1-AS2P59051 145 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 LAIR2Q6ISS4 152 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 SPAG16Q8N0X2 631 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 DMBX1Q8NFW5 382 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 OR10W1Q8NGF6 305 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 GPHA2Q96T91 129 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 C8orf4Q9NR00 106 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 FKBP14Q9NWM8 211 aa12.95□□□□□ -0.34
TSPAN3-204ENST00000558394 PTGES3LE9PB15 166 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 UPK2O00526 184 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 NUPL2O15504 423 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 TNFSF12O43508 249 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 CD5P06127 495 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 SERPINE2P07093 398 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 NQO2P16083 231 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 TAS2R31P59538 309 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 RPS25P62851 125 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 EIF4EBP1Q13541 118 aaPredicted RBP12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 SOHLH1Q5JUK2 328 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 CNIH2Q6PI25 160 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 ZNF575Q86XF7 245 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 PACRGLQ8N7B6 248 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 NDUFAF3Q9BU61 184 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 LSM2Q9Y333 95 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 DNAH17Q9UFH2 4485 aa12.94□□□□□ -0.34
TSPAN3-204ENST00000558394 DEFB131BA0A096LNP1 70 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 TRAV14DV4A0A0A6YYC5 116 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 PDCD5O14737 125 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 DFFBO76075 338 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 GNAO1P09471 354 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 TRAPPC2P0DI81 140 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 TRAPPC2BP0DI82 140 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 RBMY1A1P0DJD3 496 aaKnown RBP12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 RBMY1CP0DJD4 496 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 DEFB131AP59861 70 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 CATR1Q13166 79 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 RBMY1FQ15415 496 aaKnown RBP12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 ATG5Q9H1Y0 275 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 DCSTAMPQ9H295 470 aa12.93□□□□□ -0.34
TSPAN3-204ENST00000558394 TRAV3A0A0B4J244 114 aa12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 HPRT1P00492 218 aa12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 IFNA10P01566 189 aa12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 AMBPP02760 352 aa12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 RPL11P62913 178 aaKnown RBP12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 TCF24Q7RTU0 167 aa12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 SECTM1Q8WVN6 248 aa12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 HINT2Q9BX68 163 aa12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 CCDC90BQ9GZT6 254 aa12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 TMEM140Q9NV12 185 aa12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 ELF5Q9UKW6 265 aaPredicted RBP12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 F11RQ9Y624 299 aaKnown RBP12.92□□□□□ -0.34
TSPAN3-204ENST00000558394 IGHV3OR16-13A0A075B7E8 117 aa12.91□□□□□ -0.34
TSPAN3-204ENST00000558394 IGHV3-74A0A0B4J1X5 117 aa12.91□□□□□ -0.34
TSPAN3-204ENST00000558394 SULT1C2O00338 296 aa12.91□□□□□ -0.34
TSPAN3-204ENST00000558394 RBFOX2O43251 390 aaKnown RBP eCLIP12.91□□□□□ -0.34
TSPAN3-204ENST00000558394 RCN1Q15293 331 aa12.91□□□□□ -0.34
TSPAN3-204ENST00000558394 CDNFQ49AH0 187 aa12.91□□□□□ -0.34
TSPAN3-204ENST00000558394 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
TSPAN3-204ENST00000558394 OR1L8Q8NGR8 309 aa12.91□□□□□ -0.34
TSPAN3-204ENST00000558394 GIMAP1Q8WWP7 306 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms