RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 BRI3O95415 125 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 IGLV1-40P01703 118 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 OPN1MWP04001 364 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 HOXB5P09067 269 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 OPN1MW2P0DN77 364 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 OPN1MW3P0DN78 364 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 CHRNA7P36544 502 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 PRCDQ00LT1 54 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 FOXE3Q13461 319 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 SMCO1Q147U7 214 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 AARDQ4LEZ3 155 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 C10orf55Q5SWW7 151 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 ASPHD1Q5U4P2 390 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 SHISA2Q6UWI4 295 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 Q6ZRM9 215 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 ZNF329Q86UD4 541 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 C12orf45Q8N5I9 185 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-204ENST00000558172 TTC9CQ8N5M4 171 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 OR52B4Q8NGK2 314 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 OR52E5Q8NH55 327 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 SPATA3Q8NHX4 192 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 FAM110DQ8TAY7 271 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-204ENST00000558172 CITED1Q99966 193 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 SEC22CQ9BRL7 303 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 ZFP57Q9NU63 452 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 CACNG5Q9UF02 275 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 CGB1A6NKQ9 187 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 DBX1A6NMT0 343 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 NPIPB5A8MRT5 1133 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 E7EUB6 86 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 ST8SIA3O43173 380 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 IFNA17P01571 189 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 CRYGCP07315 174 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 MYOD1P15172 320 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 SPNP16150 400 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 PSMB8P28062 276 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 SPCS3P61009 180 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 CD83Q01151 205 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 IZUMO4Q1ZYL8 232 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 CXorf66Q5JRM2 361 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-204ENST00000558172 GGNBP1Q5YKI7 109 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 TMEM65Q6PI78 240 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 RNF152Q8N8N0 203 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 OR5T1Q8NG75 326 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 HINT2Q9BX68 163 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 SLA2Q9H6Q3 261 aa8.2□□□□□ -1.1
LRRC28-204ENST00000558172 A0A1B0GW64 132 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 IGLC7A0M8Q6 106 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 HMX3A6NHT5 357 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 FAM90A26D6RGX4 464 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 INS-IGF2F8WCM5 200 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 CYB5BO43169 146 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 ADAP1O75689 374 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 PF4V1P10720 104 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 CD28P10747 220 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 CTRB1P17538 263 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 PSMB6P28072 239 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 RAB9AP51151 201 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 KRTAP10-3P60369 221 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 ERHP84090 104 aaKnown RBP8.19□□□□□ -1.1
LRRC28-204ENST00000558172 PDLIM3Q53GG5 364 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-204ENST00000558172 CTRB2Q6GPI1 263 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 C10orf99Q6UWK7 81 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 UXS1Q8NBZ7 420 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 OR1L6Q8NGR2 347 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 OR1S1Q8NH92 325 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 PLEKHA3Q9HB20 300 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 ENY2Q9NPA8 101 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 ZNF355PQ9NSJ1 428 aa8.19□□□□□ -1.1
LRRC28-204ENST00000558172 TSSC4Q9Y5U2 329 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-204ENST00000558172 WNK1Q9H4A3 2382 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 TCRBV4S1A1TA0A5B7 111 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 SOX15O60248 233 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 PITX3O75364 302 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 APELAP0DMC3 54 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 OR13C7P0DN81 318 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 HIST1H1BP16401 226 aaKnown RBP8.18□□□□□ -1.1
LRRC28-204ENST00000558172 OXA1LQ15070 435 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 OR10W1Q8NGF6 305 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 THYN1Q9P016 225 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 HSPB7Q9UBY9 170 aa8.18□□□□□ -1.1
LRRC28-204ENST00000558172 A0A0G2JLM5 398 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 C7orf66A4D0T2 115 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 MED6O75586 246 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 LY86O95711 162 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 TRGV3P03979 118 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 RPLP1P05386 114 aaKnown RBP8.17□□□□□ -1.1
LRRC28-204ENST00000558172 DEFA4P12838 97 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 AREGP15514 252 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 CDX1P47902 265 aaPredicted RBP8.17□□□□□ -1.1
LRRC28-204ENST00000558172 HOXA1P49639 335 aaPredicted RBP8.17□□□□□ -1.1
LRRC28-204ENST00000558172 SUB1P53999 127 aaKnown RBP eCLIP8.17□□□□□ -1.1
LRRC28-204ENST00000558172 TPPP2P59282 170 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 WT1-ASQ06250 92 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 TNFRSF9Q07011 255 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 SRSF4Q08170 494 aaKnown RBP8.17□□□□□ -1.1
LRRC28-204ENST00000558172 TATDN3Q17R31 274 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 KLK9Q2XQG4 91 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 TCTEX1D4Q5JR98 221 aa8.17□□□□□ -1.1
LRRC28-204ENST00000558172 NDUFA11Q86Y39 141 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 1187.1 ms